Information for 24-ATGACAAAGGTAAAA (Motif 72)

C G T A A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C G T
p-value:1e-6
log p-value:-1.401e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets119.8 +/- 47.0bp
Average Position of motif in Background102.5 +/- 54.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ATGACAAAGGTAAAA
--RACAAWGG-----
 C G T A A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A C G T A
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATGACAAAGGTAAAA
AAAACAAAGG-----
 C G T A A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATGACAAAGGTAAAA
VNAGGKCAAAGGTCA--
 A C G T A C G T C G T A A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A C G T A
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATGACAAAGGTAAAA
TAGGGCAAAGGTCA--
 A C G T C G T A A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATGACAAAGGTAAAA
AAAGGTCAAAGGTCAAC
 A C G T A C G T C G T A A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A C G T A
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATGACAAAGGTAAAA
GAGGTCAAAGGTCA--
 A C G T C G T A A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A C G T A
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATGACAAAGGTAAAA
GTAGGGCAAAGGTCA--
 A C G T A C G T C G T A A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A C G T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

NR2F1(var.2)/MA1537.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATGACAAAGGTAAAA
GAGGTCAAAGGTCAC-
 A C G T C G T A A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A C G T A
T C A G T C G A C A T G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A G T A C A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:forward strand
Alignment:ATGACAAAGGTAAAA
----CAAAGGTCAAA
 C G T A A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A C G T A
A C G T A C G T A C G T A C G T G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

SOX10/MA0442.2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATGACAAAGGTAAAA
AAAACAAAGAA----
 C G T A A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A C G T A
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T A C G T A C G T A C G T