Information for 19-CACCTACA (Motif 75)

A G T C C G T A A G T C A T G C A C G T C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G T A A T C G A C T G A C G T A C T G
p-value:1e-5
log p-value:-1.229e+01
Information Content per bp:1.956
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif29.8
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets102.6 +/- 64.6bp
Average Position of motif in Background127.6 +/- 47.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF3/MA0522.3/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CACCTACA-
CGCACCTGCCC
 A C G T A C G T A G T C C G T A A G T C A T G C A C G T C G T A A G T C C G T A A C G T
T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CACCTACA-
CGCACCTGCCG
 A C G T A C G T A G T C C G T A A G T C A T G C A C G T C G T A A G T C C G T A A C G T
T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G

ZKSCAN1/MA1585.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CACCTACA--
CACCTACTAT
 A G T C C G T A A G T C A T G C A C G T C G T A A G T C C G T A A C G T A C G T
A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CACCTACA-
GCACGTACCC
 A C G T A G T C C G T A A G T C A T G C A C G T C G T A A G T C C G T A A C G T
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CACCTACA-
SNGCACCTGCHS
 A C G T A C G T A C G T A G T C C G T A A G T C A T G C A C G T C G T A A G T C C G T A A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

SNAI1/MA1558.1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CACCTACA
NGCACCTGCN
 A C G T A C G T A G T C C G T A A G T C A T G C A C G T C G T A A G T C C G T A
G A C T T C A G G A T C G T C A G A T C A G T C C G A T C A T G G A T C G A T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CACCTACA
TGACACCT---
 A C G T A C G T A C G T A G T C C G T A A G T C A T G C A C G T C G T A A G T C C G T A
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T

ZEB1/MA0103.3/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CACCTACA-
CCCACCTGCGC
 A C G T A C G T A G T C C G T A A G T C A T G C A C G T C G T A A G T C C G T A A C G T
A T G C A T G C A G T C C T G A A G T C T A G C A G C T T C A G A T G C T A C G A T G C

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CACCTACA--
CAGCACCTGCCCC
 A C G T A C G T A C G T A G T C C G T A A G T C A T G C A C G T C G T A A G T C C G T A A C G T A C G T
A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CACCTACA
NNCACCTGNN
 A C G T A C G T A G T C C G T A A G T C A T G C A C G T C G T A A G T C C G T A
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A