Information for 3-TAGCGA (Motif 79)

A C G T C G T A A C T G A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A G T C C G A T G T C A
p-value:1e-4
log p-value:-9.680e+00
Information Content per bp:1.901
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif4.85%
Number of Background Sequences with motif135.3
Percentage of Background Sequences with motif2.80%
Average Position of motif in Targets115.1 +/- 64.5bp
Average Position of motif in Background106.8 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TAGCGA
CAGCC-
 A C G T C G T A A C T G A G T C A C T G C G T A
T A G C C G T A A C T G A G T C A T G C A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TAGCGA----
CCGCATAGCAACGGA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

ZBTB33/MA0527.1/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TAGCGA---
NAGNTCTCGCGAGAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C G T A C G T
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

GFX(?)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TAGCGA----
TCTCGCGAGAAT
 A C G T A C G T A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T
G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAGCGA-------
TTGACCGAGAATTCC
 A C G T A C G T A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

ZBED1/MA0749.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TAGCGA----
CTATCGCGACATA
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T
G T A C C G A T T C G A G A C T A G T C T C A G G A T C T A C G T C G A G A T C G C T A A C G T C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TAGCGA----
TACCATAGCAACGGT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:8
Score:0.58
Offset:-9
Orientation:forward strand
Alignment:---------TAGCGA--------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TAGCGA
CGGAGC--
 A C G T A C G T A C G T C G T A A C T G A G T C A C T G C G T A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

CUX2/MA0755.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TAGCGA---
TTATCGATTA
 A C G T A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C G T A C G T
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A