Information for 4-CCGYYT (Motif 82)

A G T C A T G C A C T G A G T C A G C T A C G T
Reverse Opposite:
C G T A T C G A C T A G A G T C A T C G A C T G
p-value:1e-3
log p-value:-7.852e+00
Information Content per bp:1.832
Number of Target Sequences with motif199.0
Percentage of Target Sequences with motif16.92%
Number of Background Sequences with motif650.7
Percentage of Background Sequences with motif13.45%
Average Position of motif in Targets101.4 +/- 57.5bp
Average Position of motif in Background97.8 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CENPB/MA0637.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCGYYT--------
CCCGCATACAACGAA
 A C G T A G T C A T G C A C T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G A T C G A T C A C T G A G T C C G T A G A C T T G C A T A G C G C T A T C G A G T A C T C A G G C T A G T C A

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CCGYYT----
TCGTACCCGCATCATT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T G C A C T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCGYYT-
TACCCGCATN
 A C G T A C G T A C G T A G T C A T G C A C T G A G T C A G C T A C G T A C G T
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCGYYT-
BRRCVGTTDN
 A C G T A C G T A C G T A G T C A T G C A C T G A G T C A G C T A C G T A C G T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

PRDM4/MA1647.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCGYYT---
GTCTGTTTCTA
 A C G T A C G T A G T C A T G C A C T G A G T C A G C T A C G T A C G T A C G T A C G T
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A

TFCP2/MA0145.3/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCGYYT-
AAACCGGTTT
 A C G T A C G T A C G T A G T C A T G C A C T G A G T C A G C T A C G T A C G T
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCGYYT--
CTGTCTGG
 A G T C A T G C A C T G A G T C A G C T A C G T A C G T A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

BARHL2/MA0635.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCGYYT---
ANCGTTTANN
 A C G T A G T C A T G C A C T G A G T C A G C T A C G T A C G T A C G T A C G T
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

GCM1/MA0646.1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCGYYT-
GTACCCGCATN
 A C G T A C G T A C G T A C G T A G T C A T G C A C T G A G T C A G C T A C G T A C G T
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

BARHL1/MA0877.2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCGYYT--
NCGTTTAN
 A G T C A T G C A C T G A G T C A G C T A C G T A C G T A C G T
G T A C G A T C C T A G G C A T A C G T G C A T C G T A A T C G