Information for 3-CTGCTGGTCT (Motif 10)

A T G C C G A T A C T G T A G C G C A T C A T G A C T G A C G T A G T C G C A T
Reverse Opposite:
C G T A T C A G T G C A T G A C G T A C C G T A A T C G T G A C G C T A T A C G
p-value:1e-42
log p-value:-9.747e+01
Information Content per bp:1.674
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif8.26%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.03%
Average Position of motif in Targets98.6 +/- 47.6bp
Average Position of motif in Background80.8 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CTGCTGGTCT
NNCCTGCTGNG--
 A C G T A C G T A C G T A T G C C G A T A C T G T A G C G C A T C A T G A C T G A C G T A G T C G C A T
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CTGCTGGTCT----
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A T G C C G A T A C T G T A G C G C A T C A T G A C T G A C G T A G T C G C A T A C G T A C G T A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTGCTGGTCT
CAGCTGNT--
 A T G C C G A T A C T G T A G C G C A T C A T G A C T G A C G T A G T C G C A T
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGCTGGTCT--
CYWSTGGTCARA
 A T G C C G A T A C T G T A G C G C A T C A T G A C T G A C G T A G T C G C A T A C G T A C G T
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A

ZNF341/MA1655.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGCTGGTCT-
NNGGCTGTTCCN
 A C G T A T G C C G A T A C T G T A G C G C A T C A T G A C T G A C G T A G T C G C A T A C G T
A T C G A G C T C A T G T A C G T A G C A G C T T A C G G A C T A C G T A T G C G A T C G T A C

ZNF317/MA1593.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTGCTGGTCT
NNTCTGCTGTNA-
 A C G T A C G T A C G T A T G C C G A T A C T G T A G C G C A T C A T G A C T G A C G T A G T C G C A T
C G T A C T A G C G A T G A T C G C A T C A T G G A T C G C A T A C T G G C A T A G C T G C T A A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGCTGGTCT
HCAGCTGDTN-
 A C G T A T G C C G A T A C T G T A G C G C A T C A T G A C T G A C G T A G T C G C A T
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T

Zic2/MA1629.1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGTCT
CCCCCTGCTGTGNN
 A C G T A C G T A C G T A C G T A T G C C G A T A C T G T A G C G C A T C A T G A C T G A C G T A G T C G C A T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTGCTGGTCT
NAACAGCTGG---
 A C G T A C G T A C G T A T G C C G A T A C T G T A G C G C A T C A T G A C T G A C G T A G T C G C A T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGTCT
CCCCCTGCTGTG--
 A C G T A C G T A C G T A C G T A T G C C G A T A C T G T A G C G C A T C A T G A C T G A C G T A G T C G C A T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T