Information for 4-AATWATTTTGAAAAT (Motif 11)

G C T A C G T A A C G T G C A T T C G A C G A T G A C T G C A T C A G T C T A G G C T A G C T A G T C A C G T A A C G T
Reverse Opposite:
C G T A C G A T A C G T C G A T C G A T G A T C G T C A C G T A C T G A G C T A A G C T C G A T G T C A G C A T C G A T
p-value:1e-41
log p-value:-9.624e+01
Information Content per bp:1.670
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif6.47%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets99.8 +/- 54.3bp
Average Position of motif in Background72.6 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AATWATTTTGAAAAT
CATTGTTATGCAAAT
 G C T A C G T A A C G T G C A T T C G A C G A T G A C T G C A T C A G T C T A G G C T A G C T A G T C A C G T A A C G T
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

POU2F1/MA0785.1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AATWATTTTGAAAAT-
----AATATGCAAATT
 G C T A C G T A A C G T G C A T T C G A C G A T G A C T G C A T C A G T C T A G G C T A G C T A G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

POU3F3/MA0788.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AATWATTTTGAAAAT--
----ATTATGCTAATTT
 G C T A C G T A A C G T G C A T T C G A C G A T G A C T G C A T C A G T C T A G G C T A G C T A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

POU1F1/MA0784.1/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AATWATTTTGAAAAT---
----AATATGCAAATTAG
 G C T A C G T A A C G T G C A T T C G A C G A T G A C T G C A T C A G T C T A G G C T A G C T A G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

POU3F1/MA0786.1/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AATWATTTTGAAAAT--
-----TTATGCAAATTA
 G C T A C G T A A C G T G C A T T C G A C G A T G A C T G C A T C A G T C T A G G C T A G C T A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU3F2/MA0787.1/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AATWATTTTGAAAAT--
-----TTATGCAAATTA
 G C T A C G T A A C G T G C A T T C G A C G A T G A C T G C A T C A G T C T A G G C T A G C T A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AATWATTTTGAAAAT-------
--NTAATTDGCYAATTANNWWD
 G C T A C G T A A C G T G C A T T C G A C G A T G A C T G C A T C A G T C T A G G C T A G C T A G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AATWATTTTGAAAAT
-----TTATGCAAAT
 G C T A C G T A A C G T G C A T T C G A C G A T G A C T G C A T C A G T C T A G G C T A G C T A G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AATWATTTTGAAAAT
CTTTGTTATGCAAAT
 G C T A C G T A A C G T G C A T T C G A C G A T G A C T G C A T C A G T C T A G G C T A G C T A G T C A C G T A A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AATWATTTTGAAAAT
------TATGCAAAT
 G C T A C G T A A C G T G C A T T C G A C G A T G A C T G C A T C A G T C T A G G C T A G C T A G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T