Information for 4-CCCCAGGGCT (Motif 13)

A G T C G T A C G T A C G T A C C G T A A C T G C A T G T C A G A T G C G A C T
Reverse Opposite:
C T G A T A C G A G T C G T A C T G A C G C A T C A T G C A T G C A T G T C A G
p-value:1e-40
log p-value:-9.327e+01
Information Content per bp:1.672
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif6.34%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets106.8 +/- 55.5bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1/MA0154.4/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CCCCAGGGCT--
AGTCCCCAGGGGACT
 A C G T A C G T A C G T A G T C G T A C G T A C G T A C C G T A A C T G C A T G T C A G A T G C G A C T A C G T A C G T
C G T A C T A G A C G T A G T C G A T C G A T C G T A C C G T A C T A G C T A G C T A G T C A G T G C A G T A C G C A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CCCCAGGGCT-
GCCTCAGGGCAT
 A C G T A G T C G T A C G T A C G T A C C G T A A C T G C A T G T C A G A T G C G A C T A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CCCCAGGGCT
TGCCCCCGGGCA
 A C G T A C G T A G T C G T A C G T A C G T A C C G T A A C T G C A T G T C A G A T G C G A C T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:4
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CCCCAGGGCT
TGCCCCAGGGCA
 A C G T A C G T A G T C G T A C G T A C G T A C C G T A A C T G C A T G T C A G A T G C G A C T
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CCCCAGGGCT
GTCCCCAGGGGA
 A C G T A C G T A G T C G T A C G T A C G T A C C G T A A C T G C A T G T C A G A T G C G A C T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

TFAP2C/MA0524.2/Jaspar

Match Rank:6
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CCCCAGGGCT
TGCCCCAGGGCA
 A C G T A C G T A G T C G T A C G T A C G T A C C G T A A C T G C A T G T C A G A T G C G A C T
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CCCCAGGGCT-
TTGCCCTAGGGCAT
 A C G T A C G T A C G T A G T C G T A C G T A C G T A C C G T A A C T G C A T G T C A G A T G C G A C T A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CCCCAGGGCT-
TCACCTCTGGGCAG
 A C G T A C G T A C G T A G T C G T A C G T A C G T A C C G T A A C T G C A T G T C A G A T G C G A C T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCCCAGGGCT-
SCCTSAGGSCAW
 A C G T A G T C G T A C G T A C G T A C C G T A A C T G C A T G T C A G A T G C G A C T A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

EBF3/MA1637.1/Jaspar

Match Rank:10
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCCCAGGGCT-
TTCCCAAGGGAAT
 A C G T A C G T A G T C G T A C G T A C G T A C C G T A A C T G C A T G T C A G A T G C G A C T A C G T
A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G T C A G T C G A T G C A G C A T