Information for 9-TTCCAGACACMC (Motif 27)

G A C T A G C T G A T C G T A C C G T A T A C G T C G A T A G C G C T A T A G C G T A C G T A C
Reverse Opposite:
C A T G C A T G A T C G C G A T A T C G A G C T A T G C G C A T C A T G C T A G T C G A C T G A
p-value:1e-31
log p-value:-7.335e+01
Information Content per bp:1.484
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif8.13%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets102.6 +/- 48.8bp
Average Position of motif in Background136.3 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---TTCCAGACACMC--
CAAATCCAGACATCACA
 A C G T A C G T A C G T G A C T A G C T G A T C G T A C C G T A T A C G T C G A T A G C G C T A T A G C G T A C G T A C A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:TTCCAGACACMC
--CCAGACRSVB
 G A C T A G C T G A T C G T A C C G T A T A C G T C G A T A G C G C T A T A G C G T A C G T A C
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:TTCCAGACACMC
--CCAGACAG--
 G A C T A G C T G A T C G T A C C G T A T A C G T C G A T A G C G C T A T A G C G T A C G T A C
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:TTCCAGACACMC
--BCAGACWA--
 G A C T A G C T G A T C G T A C C G T A T A C G T C G A T A G C G C T A T A G C G T A C G T A C
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:5
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TTCCAGACACMC
-TCTAGACA---
 G A C T A G C T G A T C G T A C C G T A T A C G T C G A T A G C G C T A T A G C G T A C G T A C
A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TTCCAGACACMC
ATGCCAGACN---
 A C G T G A C T A G C T G A T C G T A C C G T A T A C G T C G A T A G C G C T A T A G C G T A C G T A C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

ZBTB26/MA1579.1/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TTCCAGACACMC-
TACTCCAGAAAAGAT
 A C G T A C G T G A C T A G C T G A T C G T A C C G T A T A C G T C G A T A G C G C T A T A G C G T A C G T A C A C G T
C A G T C G T A G A T C C G A T T G A C A G T C C T G A C T A G G T C A T C G A T G C A T G C A T C A G G T C A G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TTCCAGACACMC
AGGTGHCAGACA---
 A C G T A C G T A C G T G A C T A G C T G A T C G T A C C G T A T A C G T C G A T A G C G C T A T A G C G T A C G T A C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTCCAGACACMC
AGGTGNCAGACAG--
 A C G T A C G T A C G T G A C T A G C T G A T C G T A C C G T A T A C G T C G A T A G C G C T A T A G C G T A C G T A C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTCCAGACACMC
RHHCAGAGAGGB
 G A C T A G C T G A T C G T A C C G T A T A C G T C G A T A G C G C T A T A G C G T A C G T A C
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G