Information for 1-GAGRTGGGGC (Motif 3)

T A C G C T G A C T A G C T G A A C G T A C T G T A C G C T A G T C A G T A G C
Reverse Opposite:
A C T G A G T C A G T C A G T C A G T C G T C A A G C T A G T C G A C T A T G C
p-value:1e-52
log p-value:-1.208e+02
Information Content per bp:1.805
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif7.58%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets89.0 +/- 55.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF4/MA0039.4/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GAGRTGGGGC-
NNGGGTGGGGNN
 A C G T T A C G C T G A C T A G C T G A A C G T A C T G T A C G C T A G T C A G T A G C A C G T
T A C G C A T G C T A G A T C G T A C G G A C T C A T G C A T G C T A G C T A G T A G C A T C G

KLF1(Zf)/HUDEP2-KLF1-CutnRun(GSE136251)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GAGRTGGGGC-
VDGGGYGGGGCY
 A C G T T A C G C T G A C T A G C T G A A C G T A C T G T A C G C T A G T C A G T A G C A C G T
T C A G C T A G C T A G A C T G A C T G G A T C A C T G A C T G C T A G C T A G A G T C G A T C

KLF5/MA0599.1/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GAGRTGGGGC
GGGGNGGGGC
 T A C G C T G A C T A G C T G A A C G T A C T G T A C G C T A G T C A G T A G C
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GAGRTGGGGC--
GGGGCGGGGCCR
 T A C G C T G A C T A G C T G A A C G T A C T G T A C G C T A G T C A G T A G C A C G T A C G T
C A T G C T A G A C T G A C T G G A T C C T A G C A T G C T A G T C A G G A T C G A T C T C A G

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GAGRTGGGGC-
GGGGGCGGGGCC
 A C G T T A C G C T G A C T A G C T G A A C G T A C T G T A C G C T A G T C A G T A G C A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GAGRTGGGGC
DGGGYGKGGC
 T A C G C T G A C T A G C T G A A C G T A C T G T A C G C T A G T C A G T A G C
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GAGRTGGGGC--
AGGGGGCGGGGCTG
 A C G T A C G T T A C G C T G A C T A G C T G A A C G T A C T G T A C G C T A G T C A G T A G C A C G T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:8
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GAGRTGGGGC--
NNVDGGGYGGGGCYN
 A C G T A C G T A C G T T A C G C T G A C T A G C T G A A C G T A C T G T A C G C T A G T C A G T A G C A C G T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

MAZ/MA1522.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GAGRTGGGGC-
GGGGAGGGGNN
 T A C G C T G A C T A G C T G A A C G T A C T G T A C G C T A G T C A G T A G C A C G T
T C A G T C A G A T C G A C T G G T C A A T C G A T C G A T C G T A C G T A G C T A C G

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GAGRTGGGGC--
--HAWGRGGCCM
 T A C G C T G A C T A G C T G A A C G T A C T G T A C G C T A G T C A G T A G C A C G T A C G T
A C G T A C G T G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C