Information for 9-CCTCTATA (Motif 33)

A G T C G T A C A C G T T A G C A G C T C G T A G C A T C G T A
Reverse Opposite:
A C G T C G T A A C G T C T G A A C T G C G T A A C T G C T A G
p-value:1e-29
log p-value:-6.766e+01
Information Content per bp:1.830
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif5.10%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets89.5 +/- 54.7bp
Average Position of motif in Background129.9 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------CCTCTATA-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C G T T A G C A G C T C G T A G C A T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------CCTCTATA-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C G T T A G C A G C T C G T A G C A T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TATA-Box(TBP)/Promoter/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCTCTATA---
CCTTTTATAGNC
 A C G T A G T C G T A C A C G T T A G C A G C T C G T A G C A T C G T A A C G T A C G T A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PB0163.1_Six6_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCTCTATA-------
ATGGGATATATCCGCCT
 A C G T A C G T A G T C G T A C A C G T T A G C A G C T C G T A G C A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

PB0080.1_Tbp_1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCTCTATA------
TCTTTATATATAAATA
 A C G T A C G T A G T C G T A C A C G T T A G C A G C T C G T A G C A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

PB0128.1_Gcm1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CCTCTATA----
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C G T T A G C A G C T C G T A G C A T C G T A A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCTCTATA-
CCYMATAAAA
 A C G T A G T C G T A C A C G T T A G C A G C T C G T A G C A T C G T A A C G T
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCTCTATA---
-ATGMATATDC
 A G T C G T A C A C G T T A G C A G C T C G T A G C A T C G T A A C G T A C G T A C G T
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

FOXK2/MA1103.2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCTCTATA---
NNTGTTTACNN
 A G T C G T A C A C G T T A G C A G C T C G T A G C A T C G T A A C G T A C G T A C G T
A G T C G C A T C G A T C T A G G A C T C A G T C G A T G C T A G A T C G C T A G C A T

Foxo1/MA0480.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCTCTATA--
TCCTGTTTACA
 A C G T A G T C G T A C A C G T T A G C A G C T C G T A G C A T C G T A A C G T A C G T
C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A