Information for 2-TCHGRGACCACCACAGCCTC (Motif 38)

G A C T A G T C G A C T T A C G C T G A T A C G T G C A G A T C G A T C C G T A G T A C A G T C G C T A A G T C G T C A T A C G A G T C G A T C G C A T A T G C
Reverse Opposite:
T A C G C G T A C T A G T C A G A T G C C A G T C T A G C G A T C T A G A C T G G C A T C T A G C T A G A C G T A T G C G A C T A T G C C T G A C T A G C T G A
p-value:1e-25
log p-value:-5.960e+01
Information Content per bp:1.600
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.68%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets97.3 +/- 52.3bp
Average Position of motif in Background74.6 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:1
Score:0.65
Offset:9
Orientation:reverse strand
Alignment:TCHGRGACCACCACAGCCTC-
---------ACCACATCCTGT
 G A C T A G T C G A C T T A C G C T G A T A C G T G C A G A T C G A T C C G T A G T A C A G T C G C T A A G T C G T C A T A C G A G T C G A T C G C A T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:TCHGRGACCACCACAGCCTC
-------AAACCACAGC---
 G A C T A G T C G A C T T A C G C T G A T A C G T G C A G A T C G A T C C G T A G T A C A G T C G C T A A G T C G T C A T A C G A G T C G A T C G C A T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TCHGRGACCACCACAGCCTC
------NWAACCACADNN--
 G A C T A G T C G A C T T A C G C T G A T A C G T G C A G A T C G A T C C G T A G T A C A G T C G C T A A G T C G T C A T A C G A G T C G A T C G C A T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:4
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:TCHGRGACCACCACAGCCTC
--------GGCCACACCCAN
 G A C T A G T C G A C T T A C G C T G A T A C G T G C A G A T C G A T C C G T A G T A C A G T C G C T A A G T C G T C A T A C G A G T C G A T C G C A T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

Klf1/MA0493.1/Jaspar

Match Rank:5
Score:0.60
Offset:8
Orientation:forward strand
Alignment:TCHGRGACCACCACAGCCTC
--------GGCCACACCCA-
 G A C T A G T C G A C T T A C G C T G A T A C G T G C A G A T C G A T C C G T A G T A C A G T C G C T A A G T C G T C A T A C G A G T C G A T C G C A T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T

ZNF460/MA1596.1/Jaspar

Match Rank:6
Score:0.59
Offset:9
Orientation:forward strand
Alignment:TCHGRGACCACCACAGCCTC-----
---------GCCTCAGCCTCCCGAG
 G A C T A G T C G A C T T A C G C T G A T A C G T G C A G A T C G A T C C G T A G T A C A G T C G C T A A G T C G T C A T A C G A G T C G A T C G C A T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T G C A T G C A G C T A T G C T G C A C T A G A G T C A T G C C A G T A T G C A T G C A G T C T C A G T C G A T C A G

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:TCHGRGACCACCACAGCCTC
-------AAACCACAGAN--
 G A C T A G T C G A C T T A C G C T G A T A C G T G C A G A T C G A T C C G T A G T A C A G T C G C T A A G T C G T C A T A C G A G T C G A T C G C A T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

KLF2/MA1515.1/Jaspar

Match Rank:8
Score:0.57
Offset:8
Orientation:forward strand
Alignment:TCHGRGACCACCACAGCCTC
--------CACCACGCCCA-
 G A C T A G T C G A C T T A C G C T G A T A C G T G C A G A T C G A T C C G T A G T A C A G T C G C T A A G T C G T C A T A C G A G T C G A T C G C A T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A T G A C G T A C T G C A A G T C T C A G A T G C T A G C A G T C G C T A A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TCHGRGACCACCACAGCCTC--
-------NRGCCCCRCCCHBNN
 G A C T A G T C G A C T T A C G C T G A T A C G T G C A G A T C G A T C C G T A G T A C A G T C G C T A A G T C G T C A T A C G A G T C G A T C G C A T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TCHGRGACCACCACAGCCTC
------NAAACCACAG----
 G A C T A G T C G A C T T A C G C T G A T A C G T G C A G A T C G A T C C G T A G T A C A G T C G C T A A G T C G T C A T A C G A G T C G A T C G C A T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T