Information for 16-AGTCGTGTAT (Motif 39)

C G T A T C A G G A C T G A T C A C T G C A G T C A T G A C G T T G C A C A G T
Reverse Opposite:
G T C A A C G T G T C A G T A C G T C A T G A C C T A G C T G A A G T C G A C T
p-value:1e-24
log p-value:-5.697e+01
Information Content per bp:1.740
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets100.3 +/- 54.9bp
Average Position of motif in Background178.5 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGTCGTGTAT-
NHGTCGTGAYDN
 A C G T C G T A T C A G G A C T G A T C A C T G C A G T C A T G A C G T T G C A C A G T A C G T
C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C

PB0136.1_IRC900814_2/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AGTCGTGTAT
ATGGAAAGTCGTAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T C A G G A C T G A T C A C T G C A G T C A T G A C G T T G C A C A G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGTCGTGTAT---
NNGTANTGTTTTNC
 A C G T C G T A T C A G G A C T G A T C A C T G C A G T C A T G A C G T T G C A C A G T A C G T A C G T A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGTCGTGTAT---
-NNTGTGGATTSS
 C G T A T C A G G A C T G A T C A C T G C A G T C A T G A C G T T G C A C A G T A C G T A C G T A C G T
A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGTCGTGTAT----
---AATGTATCAAT
 C G T A T C A G G A C T G A T C A C T G C A G T C A T G A C G T T G C A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGTCGTGTAT---
TAAAGTCGTAAAATAG
 A C G T A C G T A C G T C G T A T C A G G A C T G A T C A C T G C A G T C A T G A C G T T G C A C A G T A C G T A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PB0179.1_Sp100_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGTCGTGTAT---
TCCGTCGCTTAAAAG
 A C G T A C G T C G T A T C A G G A C T G A T C A C T G C A G T C A T G A C G T T G C A C A G T A C G T A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGTCGTGTAT----
---TGTGGATTNNN
 C G T A T C A G G A C T G A T C A C T G C A G T C A T G A C G T T G C A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PH0047.1_Hoxa11/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGTCGTGTAT---
TAAAGTCGTAAAACAT
 A C G T A C G T A C G T C G T A T C A G G A C T G A T C A C T G C A G T C A T G A C G T T G C A C A G T A C G T A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGTCGTGTAT---
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T C G T A T C A G G A C T G A T C A C T G C A G T C A T G A C G T T G C A C A G T A C G T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T