Information for 13-TCGCAACC (Motif 43)

G A C T T A G C T A C G T A G C G T C A T G C A A G T C G T A C
Reverse Opposite:
C A T G T C A G A C G T C A G T A T C G A T G C A T C G C T G A
p-value:1e-22
log p-value:-5.182e+01
Information Content per bp:1.642
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif4.27%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets103.2 +/- 54.9bp
Average Position of motif in Background104.2 +/- 39.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----TCGCAACC----
ACTATGCCAACCTACC
 A C G T A C G T A C G T A C G T G A C T T A G C T A C G T A G C G T C A T G C A A G T C G T A C A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

RFX7/MA1554.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TCGCAACC
NTAGCAACG
 A C G T G A C T T A G C T A C G T A G C G T C A T G C A A G T C G T A C
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TCGCAACC--
TACCATAGCAACGGT
 A C G T A C G T A C G T A C G T A C G T G A C T T A G C T A C G T A G C G T C A T G C A A G T C G T A C A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCGCAACC
ATGCCAACC
 A C G T G A C T T A G C T A C G T A G C G T C A T G C A A G T C G T A C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

RFX1/MA0509.2/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TCGCAACC-
TNCCATAGCAACNN
 A C G T A C G T A C G T A C G T A C G T G A C T T A G C T A C G T A G C G T C A T G C A A G T C G T A C A C G T
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.67
Offset:-9
Orientation:forward strand
Alignment:---------TCGCAACC------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C T A C G T A G C G T C A T G C A A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:7
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TCGCAACC--
CCGCATAGCAACGGA
 A C G T A C G T A C G T A C G T A C G T G A C T T A G C T A C G T A G C G T C A T G C A A G T C G T A C A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0167.1_Sox13_2/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TCGCAACC-----
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T A C G T G A C T T A G C T A C G T A G C G T C A T G C A A G T C G T A C A C G T A C G T A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

KLF4/MA0039.4/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCGCAACC--
CGCCCCACCCCC
 A C G T A C G T G A C T T A G C T A C G T A G C G T C A T G C A A G T C G T A C A C G T A C G T
T A G C A T C G G A T C G A T C G T A C G T A C C T G A A T G C T A G C G A T C G T A C A T G C

RFX3/MA0798.2/Jaspar

Match Rank:10
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TCGCAACC-
TNCCATAGCAACNN
 A C G T A C G T A C G T A C G T A C G T G A C T T A G C T A C G T A G C G T C A T G C A A G T C G T A C A C G T
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G