Information for 3-GCGTCT (Motif 52)

A C T G A G T C A C T G C G A T A G T C C G A T
Reverse Opposite:
C G T A A C T G C G T A A G T C A C T G A G T C
p-value:1e-17
log p-value:-3.979e+01
Information Content per bp:1.911
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif6.61%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif1.64%
Average Position of motif in Targets101.7 +/- 49.0bp
Average Position of motif in Background96.0 +/- 63.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GCGTCT--
VBSYGTCTGG
 A C G T A C G T A C T G A G T C A C T G C G A T A G T C C G A T A C G T A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCGTCT--
CTGTCTGG
 A C T G A G T C A C T G C G A T A G T C C G A T A C G T A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PROX1/MA0794.1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GCGTCT--
TAAGGCGTCTTG
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G C G A T A G T C C G A T A C G T A C G T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

OSR2/MA1646.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCGTCT----
NNGCTTCTGTNN
 A C G T A C G T A C T G A G T C A C T G C G A T A G T C C G A T A C G T A C G T A C G T A C G T
A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GCGTCT------
GGNGCGNCTGTTNNN
 A C G T A C G T A C G T A C T G A G T C A C T G C G A T A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Smad4/MA1153.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCGTCT---
-TGTCTAGA
 A C T G A G T C A C T G C G A T A G T C C G A T A C G T A C G T A C G T
A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCGTCT
TGCGTG-
 A C G T A C T G A G T C A C T G C G A T A G T C C G A T
G A C T A C T G A G T C A C T G A C G T A C T G A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCGTCT-
NRRGGGTCTT
 A C G T A C G T A C G T A C T G A G T C A C T G C G A T A G T C C G A T A C G T
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCGTCT-------
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G C G A T A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0143.1_Klf7_2/Jaspar

Match Rank:10
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------GCGTCT----
NNNTNGGGCGTATNNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G C G A T A G T C C G A T A C G T A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T