Information for 20-AGCCAGGCAGCCCCT (Motif 54)

T C G A A T C G T A G C G T A C G T C A A C T G A C T G T G A C G C T A T A C G G T A C G T A C G T A C A G T C C G A T
Reverse Opposite:
G C T A T A C G C A T G C A T G C A T G A T G C C G A T A C T G T G A C T G A C C A G T A C T G A T C G T A G C A G C T
p-value:1e-16
log p-value:-3.717e+01
Information Content per bp:1.606
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.44%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets87.8 +/- 57.7bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCCAGGCAGCCCCT
CAAATCCAGACATCACA-
 A C G T A C G T A C G T T C G A A T C G T A G C G T A C G T C A A C T G A C T G T G A C G C T A T A C G G T A C G T A C G T A C A G T C C G A T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGCCAGGCAGCCCCT
--CCAGACAG-----
 T C G A A T C G T A G C G T A C G T C A A C T G A C T G T G A C G C T A T A C G G T A C G T A C G T A C A G T C C G A T
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGCCAGGCAGCCCCT
--CCAGACRSVB---
 T C G A A T C G T A G C G T A C G T C A A C T G A C T G T G A C G C T A T A C G G T A C G T A C G T A C A G T C C G A T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

KLF17/MA1514.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCCAGGCAGCCCCT
CACCACGCACCCCTT
 T C G A A T C G T A G C G T A C G T C A A C T G A C T G T G A C G C T A T A C G G T A C G T A C G T A C A G T C C G A T
G T A C G T C A T G A C T G A C G C T A G A T C T C A G G T A C C G T A T A G C T A G C G A T C T G A C G A C T G A C T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGCCAGGCAGCCCCT
CTGGCAGNCTGCCA--
 A C G T T C G A A T C G T A G C G T A C G T C A A C T G A C T G T G A C G C T A T A C G G T A C G T A C G T A C A G T C C G A T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGCCAGGCAGCCCCT----
--TCACCCCGCCCCAAATT
 T C G A A T C G T A G C G T A C G T C A A C T G A C T G T G A C G C T A T A C G G T A C G T A C G T A C A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

ETV4/MA0764.2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGCCAGGCAGCCCCT
--ACAGGAAGTG---
 T C G A A T C G T A G C G T A C G T C A A C T G A C T G T G A C G C T A T A C G G T A C G T A C G T A C A G T C C G A T
A C G T A C G T T C G A T A G C G T C A A T C G A C T G C G T A G T C A A C T G A G C T T C A G A C G T A C G T A C G T

NFYA/MA0060.3/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGCCAGGCAGCCCCT
AACCAATCAGA----
 T C G A A T C G T A G C G T A C G T C A A C T G A C T G T G A C G C T A T A C G G T A C G T A C G T A C A G T C C G A T
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGCCAGGCAGCCCCT
ATGCCAGACN------
 A C G T T C G A A T C G T A G C G T A C G T C A A C T G A C T G T G A C G C T A T A C G G T A C G T A C G T A C A G T C C G A T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF684/MA1600.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGCCAGGCAGCCCCT---
ATACAGTCCACCCCTTTA
 T C G A A T C G T A G C G T A C G T C A A C T G A C T G T G A C G C T A T A C G G T A C G T A C G T A C A G T C C G A T A C G T A C G T A C G T
C T G A A G C T T C G A A G T C C G T A A T C G A C G T T A G C G A T C C G T A A T G C T G A C A G T C A G T C G C A T G A C T C A G T T C G A