Information for 13-SCCGTT (Motif 65)

A T G C A G T C A G T C A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C T G A C T G A T C G
p-value:1e-8
log p-value:-1.995e+01
Information Content per bp:1.931
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif5.37%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif1.97%
Average Position of motif in Targets107.1 +/- 50.5bp
Average Position of motif in Background136.0 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--SCCGTT--
BRRCVGTTDN
 A C G T A C G T A T G C A G T C A G T C A C T G A C G T A C G T A C G T A C G T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

OVOL2/MA1545.1/Jaspar

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--SCCGTT-----
GTACCGTTATGTG
 A C G T A C G T A T G C A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G A T G C T A T A G C A T G C A C T G A G C T A C G T T C G A A G C T C A T G G A C T A T C G

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:3
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-SCCGTT-
GGCVGTTR
 A C G T A T G C A G T C A G T C A C T G A C G T A C G T A C G T
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

OVOL1/MA1544.1/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---SCCGTT-----
AAAACCGTTATTTG
 A C G T A C G T A C G T A T G C A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G T A G C T A A G T C A G T C C A T G A C G T A C G T G T C A A G C T A G C T G A C T A T C G

PB0046.1_Mybl1_1/Jaspar

Match Rank:5
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------SCCGTT-----
TTGAAAACCGTTAATTT
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

PB0045.1_Myb_1/Jaspar

Match Rank:6
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------SCCGTT-----
ATGGAAACCGTTATTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--SCCGTT--
TGGCAGTTGG
 A C G T A C G T A T G C A G T C A G T C A C T G A C G T A C G T A C G T A C G T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--SCCGTT
TGTCGGTT
 A C G T A C G T A T G C A G T C A G T C A C T G A C G T A C G T
C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T

BARHL1/MA0877.2/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:SCCGTT---
-NCGTTTAN
 A T G C A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G A T C C T A G G C A T A C G T G C A T C G T A A T C G

RFX7/MA1554.1/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:SCCGTT-----
--CGTTGCTAT
 A T G C A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A T C G A G C T A G C T C T A G A T G C A G C T C T G A G A C T