Information for 1-TGGKAGAGTGGCTTG (Motif 19)

C G A T A C T G C A T G A C G T C G T A T A C G C T G A T A C G C G A T C A T G C T A G A G T C G C A T C A G T A C T G
Reverse Opposite:
T G A C G C T A C G T A T C A G A G T C G A T C G C T A A T G C G A C T A T G C A C G T T G C A G A T C T G A C G C T A
p-value:1e-14
log p-value:-3.320e+01
Information Content per bp:1.665
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif9.52%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets106.2 +/- 49.8bp
Average Position of motif in Background54.7 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-2/MA1645.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGKAGAGTGGCTTG
NNNTTGAGTGGNNN-
C G A T A C T G C A T G A C G T C G T A T A C G C T G A T A C G C G A T C A T G C T A G A G T C G C A T C A G T A C T G
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGGKAGAGTGGCTTG
--CTTGAGTGGCT--
C G A T A C T G C A T G A C G T C G T A T A C G C T G A T A C G C G A T C A T G C T A G A G T C G C A T C A G T A C T G
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

KLF17/MA1514.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGGKAGAGTGGCTTG
AAGGGGTGCGTGGTG--
A C G T A C G T C G A T A C T G C A T G A C G T C G T A T A C G C T G A T A C G C G A T C A T G C T A G A G T C G C A T C A G T A C T G
C T G A C T G A A C T G C T A G A T C G A T C G G C A T C A T G A G T C C T A G C G A T A C T G A C T G C A G T C A T G A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGGKAGAGTGGCTTG
---TTRAGTGSYK--
C G A T A C T G C A T G A C G T C G T A T A C G C T G A T A C G C G A T C A T G C T A G A G T C G C A T C A G T A C T G
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

SP1/MA0079.4/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGKAGAGTGGCTTG
NGTGGGCGTGGCTTN
C G A T A C T G C A T G A C G T C G T A T A C G C T G A T A C G C G A T C A T G C T A G A G T C G C A T C A G T A C T G
C T G A C T A G C A G T C T A G A C T G C T A G G A T C C T A G A C G T C T A G C A T G G A T C A G C T C G A T T C G A

SP4/MA0685.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGKAGAGTGGCTTG
NAAGGGGGCGTGGCTTN
A C G T A C G T C G A T A C T G C A T G A C G T C G T A T A C G C T G A T A C G C G A T C A T G C T A G A G T C G C A T C A G T A C T G
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TGGKAGAGTGGCTTG
---TTGAGTGSTT--
C G A T A C T G C A T G A C G T C G T A T A C G C T G A T A C G C G A T C A T G C T A G A G T C G C A T C A G T A C T G
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGGKAGAGTGGCTTG--
-TGCGGAGTGGGACTGG
C G A T A C T G C A T G A C G T C G T A T A C G C T G A T A C G C G A T C A T G C T A G A G T C G C A T C A G T A C T G A C G T A C G T
A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGGKAGAGTGGCTTG--
-NGTAGGTTGGCATNNN
C G A T A C T G C A T G A C G T C G T A T A C G C T G A T A C G C G A T C A T G C T A G A G T C G C A T C A G T A C T G A C G T A C G T
A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGGKAGAGTGGCTTG
AATTTCAAGTGGCTTN
A C G T C G A T A C T G C A T G A C G T C G T A T A C G C T G A T A C G C G A T C A T G C T A G A G T C G C A T C A G T A C T G
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A