Information for 3-ATAVTGTTTTATWAHTVMTTKYTKNAATNAGSHTRWCAWWADMAATAAKT (Motif 37)

C G T A C G A T T C G A T C A G C G A T C T A G A C G T A G C T C A G T A G C T C G T A G C A T G C T A C G T A G A T C G C A T T C G A T G A C C G A T C G A T C A G T G A T C G C A T C A T G C A T G C G T A C T G A C G A T G A T C C G T A A C T G T A C G G C T A A C G T C T G A G C A T G T A C C G T A C G T A C G A T C G T A C G T A G T A C G C T A C T G A C G A T C G T A C G T A A C T G G A C T
Reverse Opposite:
C T G A T G A C G C A T C G A T C G T A G A C T C G A T C A T G G A C T G A C T G C T A G C A T C G A T C A T G C G T A G A C T T C G A C A G T A T G C T G A C G C A T C T A G C G T A G A C T G C A T G T A C G T A C C G T A C T A G G T C A G C T A G C T A A C T G A G C T C G T A C T A G C G A T C G A T C G T A G C A T T C G A G T C A C T G A T G C A G A T C G C T A A G T C A G C T C G T A G A C T
p-value:1e-12
log p-value:-2.906e+01
Information Content per bp:1.485
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif8.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets94.3 +/- 52.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:1
Score:0.37
Offset:5
Orientation:reverse strand
Alignment:ATAVTGTTTTATWAHTVMTTKYTKNAATNAGSHTRWCAWWADMAATAAKT
-----NTTTTATGAC-----------------------------------
C G T A C G A T T C G A T C A G C G A T C T A G A C G T A G C T C A G T A G C T C G T A G C A T G C T A C G T A G A T C G C A T T C G A T G A C C G A T C G A T C A G T G A T C G C A T C A T G C A T G C G T A C T G A C G A T G A T C C G T A A C T G T A C G G C T A A C G T C T G A G C A T G T A C C G T A C G T A C G A T C G T A C G T A G T A C G C T A C T G A C G A T C G T A C G T A A C T G G A C T
A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.37
Offset:33
Orientation:forward strand
Alignment:ATAVTGTTTTATWAHTVMTTKYTKNAATNAGSHTRWCAWWADMAATAAKT
---------------------------------AACAAACAACAAGAG--
C G T A C G A T T C G A T C A G C G A T C T A G A C G T A G C T C A G T A G C T C G T A G C A T G C T A C G T A G A T C G C A T T C G A T G A C C G A T C G A T C A G T G A T C G C A T C A T G C A T G C G T A C T G A C G A T G A T C C G T A A C T G T A C G G C T A A C G T C T G A G C A T G T A C C G T A C G T A C G A T C G T A C G T A G T A C G C T A C T G A C G A T C G T A C G T A A C T G G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T A C G T

PH0018.1_Dbx1/Jaspar

Match Rank:3
Score:0.37
Offset:8
Orientation:reverse strand
Alignment:ATAVTGTTTTATWAHTVMTTKYTKNAATNAGSHTRWCAWWADMAATAAKT
--------TNATTATTAATTAATTA-------------------------
C G T A C G A T T C G A T C A G C G A T C T A G A C G T A G C T C A G T A G C T C G T A G C A T G C T A C G T A G A T C G C A T T C G A T G A C C G A T C G A T C A G T G A T C G C A T C A T G C A T G C G T A C T G A C G A T G A T C C G T A A C T G T A C G G C T A A C G T C T G A G C A T G T A C C G T A C G T A C G A T C G T A C G T A G T A C G C T A C T G A C G A T C G T A C G T A A C T G G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A G C T A A G C T G A C T C G T A C G A T G C A T C G T A C G T A G C A T C G A T C G T A C G T A G A C T C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.36
Offset:5
Orientation:reverse strand
Alignment:ATAVTGTTTTATWAHTVMTTKYTKNAATNAGSHTRWCAWWADMAATAAKT
-----TCTTTANTAATANN-------------------------------
C G T A C G A T T C G A T C A G C G A T C T A G A C G T A G C T C A G T A G C T C G T A G C A T G C T A C G T A G A T C G C A T T C G A T G A C C G A T C G A T C A G T G A T C G C A T C A T G C A T G C G T A C T G A C G A T G A T C C G T A A C T G T A C G G C T A A C G T C T G A G C A T G T A C C G T A C G T A C G A T C G T A C G T A G T A C G C T A C T G A C G A T C G T A C G T A A C T G G A C T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:5
Score:0.36
Offset:5
Orientation:reverse strand
Alignment:ATAVTGTTTTATWAHTVMTTKYTKNAATNAGSHTRWCAWWADMAATAAKT
-----NTTTTATTACN----------------------------------
C G T A C G A T T C G A T C A G C G A T C T A G A C G T A G C T C A G T A G C T C G T A G C A T G C T A C G T A G A T C G C A T T C G A T G A C C G A T C G A T C A G T G A T C G C A T C A T G C A T G C G T A C T G A C G A T G A T C C G T A A C T G T A C G G C T A A C G T C T G A G C A T G T A C C G T A C G T A C G A T C G T A C G T A G T A C G C T A C T G A C G A T C G T A C G T A A C T G G A C T
A C G T A C G T A C G T A C G T A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:6
Score:0.36
Offset:3
Orientation:reverse strand
Alignment:ATAVTGTTTTATWAHTVMTTKYTKNAATNAGSHTRWCAWWADMAATAAKT
---NANTTATATATAANGN-------------------------------
C G T A C G A T T C G A T C A G C G A T C T A G A C G T A G C T C A G T A G C T C G T A G C A T G C T A C G T A G A T C G C A T T C G A T G A C C G A T C G A T C A G T G A T C G C A T C A T G C A T G C G T A C T G A C G A T G A T C C G T A A C T G T A C G G C T A A C G T C T G A G C A T G T A C C G T A C G T A C G A T C G T A C G T A G T A C G C T A C T G A C G A T C G T A C G T A A C T G G A C T
A C G T A C G T A C G T A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.36
Offset:33
Orientation:reverse strand
Alignment:ATAVTGTTTTATWAHTVMTTKYTKNAATNAGSHTRWCAWWADMAATAAKT
---------------------------------TGCCAAAATAAACANN-
C G T A C G A T T C G A T C A G C G A T C T A G A C G T A G C T C A G T A G C T C G T A G C A T G C T A C G T A G A T C G C A T T C G A T G A C C G A T C G A T C A G T G A T C G C A T C A T G C A T G C G T A C T G A C G A T G A T C C G T A A C T G T A C G G C T A A C G T C T G A G C A T G T A C C G T A C G T A C G A T C G T A C G T A G T A C G C T A C T G A C G A T C G T A C G T A A C T G G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A A C G T

HOXD9/MA0913.2/Jaspar

Match Rank:8
Score:0.35
Offset:5
Orientation:reverse strand
Alignment:ATAVTGTTTTATWAHTVMTTKYTKNAATNAGSHTRWCAWWADMAATAAKT
-----NTTTTATTGC-----------------------------------
C G T A C G A T T C G A T C A G C G A T C T A G A C G T A G C T C A G T A G C T C G T A G C A T G C T A C G T A G A T C G C A T T C G A T G A C C G A T C G A T C A G T G A T C G C A T C A T G C A T G C G T A C T G A C G A T G A T C C G T A A C T G T A C G G C T A A C G T C T G A G C A T G T A C C G T A C G T A C G A T C G T A C G T A G T A C G C T A C T G A C G A T C G T A C G T A A C T G G A C T
A C G T A C G T A C G T A C G T A C G T C T A G C A G T A C G T C G A T C G A T C G T A A G C T C A G T T C A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:9
Score:0.35
Offset:37
Orientation:forward strand
Alignment:ATAVTGTTTTATWAHTVMTTKYTKNAATNAGSHTRWCAWWADMAATAAKT
-------------------------------------TATGTAAATAT--
C G T A C G A T T C G A T C A G C G A T C T A G A C G T A G C T C A G T A G C T C G T A G C A T G C T A C G T A G A T C G C A T T C G A T G A C C G A T C G A T C A G T G A T C G C A T C A T G C A T G C G T A C T G A C G A T G A T C C G T A A C T G T A C G G C T A A C G T C T G A G C A T G T A C C G T A C G T A C G A T C G T A C G T A G T A C G C T A C T G A C G A T C G T A C G T A A C T G G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.35
Offset:2
Orientation:reverse strand
Alignment:ATAVTGTTTTATWAHTVMTTKYTKNAATNAGSHTRWCAWWADMAATAAKT
--NNANTTTTATTGGNNN--------------------------------
C G T A C G A T T C G A T C A G C G A T C T A G A C G T A G C T C A G T A G C T C G T A G C A T G C T A C G T A G A T C G C A T T C G A T G A C C G A T C G A T C A G T G A T C G C A T C A T G C A T G C G T A C T G A C G A T G A T C C G T A A C T G T A C G G C T A A C G T C T G A G C A T G T A C C G T A C G T A C G A T C G T A C G T A G T A C G C T A C T G A C G A T C G T A C G T A A C T G G A C T
A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T