Information for 2-CAAAGCCTCC (Motif 18)

G A T C C G T A C T G A T C G A T C A G G A T C A G T C A G C T A G T C A G T C
Reverse Opposite:
C T A G T C A G T C G A T C A G C T A G A G T C A G C T A G C T C G A T C A T G
p-value:1e-14
log p-value:-3.320e+01
Information Content per bp:1.691
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif9.52%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets80.5 +/- 57.6bp
Average Position of motif in Background99.5 +/- 41.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAAAGCCTCC-
ACAAAGGNBCCT
A C G T G A T C C G T A C T G A T C G A T C A G G A T C A G T C A G C T A G T C A G T C A C G T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

SOX10/MA0442.2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAAAGCCTCC
AAAACAAAGAA---
A C G T A C G T A C G T A C G T G A T C C G T A C T G A T C G A T C A G G A T C A G T C A G C T A G T C A G T C
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T A C G T A C G T

TCF7/MA0769.2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGCCTCC
ANATCAAAGNN---
A C G T A C G T A C G T A C G T G A T C C G T A C T G A T C G A T C A G G A T C A G T C A G C T A G T C A G T C
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A A C G T A C G T A C G T

ZNF460/MA1596.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAAAGCCTCC----
GCCTCAGCCTCCCGAG
A C G T A C G T G A T C C G T A C T G A T C G A T C A G G A T C A G T C A G C T A G T C A G T C A C G T A C G T A C G T A C G T
T C A G A T G C A T G C A G C T A T G C T G C A C T A G A G T C A T G C C A G T A T G C A T G C A G T C T C A G T C G A T C A G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAAAGCCTCC
CNAGGCCT--
G A T C C G T A C T G A T C G A T C A G G A T C A G T C A G C T A G T C A G T C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CAAAGCCTCC
ACATCAAAGG----
A C G T A C G T A C G T A C G T G A T C C G T A C T G A T C G A T C A G G A T C A G T C A G C T A G T C A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

ZNF682/MA1599.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CAAAGCCTCC--
CGGGCCAAGCCCCTAT
A C G T A C G T A C G T A C G T G A T C C G T A C T G A T C G A T C A G G A T C A G T C A G C T A G T C A G T C A C G T A C G T
A G T C T C A G C T A G T C A G T A G C A G T C T G C A T G C A A C T G A G T C A G T C A T G C G T A C C G A T T C G A A G C T

HNF4G/MA0484.2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAAAGCCTCC-
TCCAAAGTCCAGA
A C G T A C G T G A T C C G T A C T G A T C G A T C A G G A T C A G T C A G C T A G T C A G T C A C G T
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGCCTCC
ASATCAAAGG----
A C G T A C G T A C G T A C G T G A T C C G T A C T G A T C G A T C A G G A T C A G T C A G C T A G T C A G T C
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAAAGCCTCC-
CTAATCCTCTT
G A T C C G T A C T G A T C G A T C A G G A T C A G T C A G C T A G T C A G T C A C G T
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T