Information for 1-CAGCTCTTCT (Motif 5)

A G T C C G T A C T A G G A T C A G C T A G T C A C G T A G C T T A G C A G C T
Reverse Opposite:
C T G A A T C G C T G A C G T A T C A G C T G A C A T G A G T C C G A T C T A G
p-value:1e-20
log p-value:-4.623e+01
Information Content per bp:1.767
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif12.38%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets104.6 +/- 49.4bp
Average Position of motif in Background124.1 +/- 0.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CAGCTCTTCT
CAGCTGTT--
 A G T C C G T A C T A G G A T C A G C T A G T C A C G T A G C T T A G C A G C T
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Tcf21/MA0832.1/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----CAGCTCTTCT
NCAACAGCTGTTGC
 A C G T A C G T A C G T A C G T A G T C C G T A C T A G G A T C A G C T A G T C A C G T A G C T T A G C A G C T
T C G A A G T C C T G A T G C A A G T C C G T A T A C G G T A C A C G T A C T G A C G T G A C T C T A G A G T C

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTCTTCT
ACAGCTGTTV-
 A C G T A G T C C G T A C T A G G A T C A G C T A G T C A C G T A G C T T A G C A G C T
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T

MSC/MA0665.1/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CAGCTCTTCT
AACAGCTGTT--
 A C G T A C G T A G T C C G T A C T A G G A T C A G C T A G T C A C G T A G C T T A G C A G C T
C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTCTTCT
CCAGCTGTTN-
 A C G T A G T C C G T A C T A G G A T C A G C T A G T C A C G T A G C T T A G C A G C T
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTCTTCT
NNGCAGCTGTT--
 A C G T A C G T A C G T A G T C C G T A C T A G G A T C A G C T A G T C A C G T A G C T T A G C A G C T
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

ATOH1(var.2)/MA1467.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTCTTCT
GACAGCTGTT--
 A C G T A C G T A G T C C G T A C T A G G A T C A G C T A G T C A C G T A G C T T A G C A G C T
C T A G C T G A A G T C C G T A A C T G G T A C C G A T A C T G A G C T A G C T A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTCTTCT
ATCAGCTGTT--
 A C G T A C G T A G T C C G T A C T A G G A T C A G C T A G T C A C G T A G C T T A G C A G C T
T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T A C G T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAGCTCTTCT
CGGCTGTTCC
 A G T C C G T A C T A G G A T C A G C T A G T C A C G T A G C T T A G C A G C T
G A T C T C A G T A C G T A G C G C A T T A C G C A G T A C G T T G A C G A T C

MYF5/MA1641.1/Jaspar

Match Rank:10
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTCTTCT
NNACAGCTGTNN-
 A C G T A C G T A C G T A G T C C G T A C T A G G A T C A G C T A G T C A C G T A G C T T A G C A G C T
T A C G T C G A T C G A T A G C C G T A A T C G T A G C G C A T A T C G A G C T A G C T A T G C A C G T