Information for 4-AATCCAGG (Motif 62)

C G T A C G T A G A C T A T G C A G T C G T C A T C A G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A T C G C T G A A C G T C G A T
p-value:1e-7
log p-value:-1.687e+01
Information Content per bp:1.861
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif20.95%
Number of Background Sequences with motif33.4
Percentage of Background Sequences with motif5.52%
Average Position of motif in Targets92.3 +/- 53.4bp
Average Position of motif in Background108.3 +/- 54.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.41
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0185.1_Tcf1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AATCCAGG---
NNTAATCCNGNCNN
 A C G T A C G T A C G T C G T A C G T A G A C T A T G C A G T C G T C A T C A G A C T G A C G T A C G T A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

PITX1/MA0682.2/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AATCCAGG
CTAATCCC--
 A C G T A C G T C G T A C G T A G A C T A T G C A G T C G T C A T C A G A C T G
G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C A C G T A C G T

PITX2/MA1547.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AATCCAGG
ATAATCCC--
 A C G T A C G T C G T A C G T A G A C T A T G C A G T C G T C A T C A G A C T G
G T C A C G A T C T G A C G T A A C G T A G T C A G T C T G A C A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AATCCAGG
TAATCCCN-
 A C G T C G T A C G T A G A C T A T G C A G T C G T C A T C A G A C T G
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AATCCAGG
CTTAATCCC--
 A C G T A C G T A C G T C G T A C G T A G A C T A T G C A G T C G T C A T C A G A C T G
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----AATCCAGG
NNCTAATCCCNN
 A C G T A C G T A C G T A C G T C G T A C G T A G A C T A T G C A G T C G T C A T C A G A C T G
G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AATCCAGG
GCTAATCC---
 A C G T A C G T A C G T C G T A C G T A G A C T A T G C A G T C G T C A T C A G A C T G
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AATCCAGG
NYTAATCCYB-
 A C G T A C G T A C G T C G T A C G T A G A C T A T G C A G T C G T C A T C A G A C T G
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AATCCAGG
YTAATCCY--
 A C G T A C G T C G T A C G T A G A C T A T G C A G T C G T C A T C A G A C T G
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AATCCAGG
ATAATCCC--
 A C G T A C G T C G T A C G T A G A C T A T G C A G T C G T C A T C A G A C T G
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T