Information for 3-GSGTTA (Motif 69)

A C T G A T G C A C T G A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A G T C A T C G A G T C
p-value:1e-4
log p-value:-1.046e+01
Information Content per bp:1.931
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif13.33%
Number of Background Sequences with motif22.5
Percentage of Background Sequences with motif3.71%
Average Position of motif in Targets77.7 +/- 57.2bp
Average Position of motif in Background113.3 +/- 70.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.80
Offset:-8
Orientation:reverse strand
Alignment:--------GSGTTA-
NMMNBAAAGGGTTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C T G A C G T A C G T C G T A A C G T
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A

ZNF652/MA1657.1/Jaspar

Match Rank:2
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GSGTTA--
GAAAGAGTTAAA
 A C G T A C G T A C G T A C G T A C T G A T G C A C T G A C G T A C G T C G T A A C G T A C G T
A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GSGTTA
NGGGATTA
 A C G T A C G T A C T G A T G C A C T G A C G T A C G T C G T A
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

PITX1/MA0682.2/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GSGTTA-
NGGATTAN
 A C G T A C T G A T G C A C T G A C G T A C G T C G T A A C G T
C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GSGTTA--
GGGATTANN
 A C G T A C T G A T G C A C T G A C G T A C G T C G T A A C G T A C G T
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

PITX2/MA1547.1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GSGTTA-
GGGATTAN
 A C G T A C T G A T G C A C T G A C G T A C G T C G T A A C G T
A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T

OVOL2/MA1545.1/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GSGTTA----
GTACCGTTATGTG
 A C G T A C G T A C G T A C T G A T G C A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C T A G C G A T G C T A T A G C A T G C A C T G A G C T A C G T T C G A A G C T C A T G G A C T A T C G

OTX2/MA0712.2/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GSGTTA---
AAGGGATTAGAA
 A C G T A C G T A C G T A C T G A T G C A C T G A C G T A C G T C G T A A C G T A C G T A C G T
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GSGTTA--
GGATTAGC
 A C T G A T G C A C T G A C G T A C G T C G T A A C G T A C G T
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GSGTTA--
VRGGATTARN
 A C G T A C G T A C T G A T G C A C T G A C G T A C G T C G T A A C G T A C G T
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C