Information for 4-CATDCTCAVCTC (Motif 28)

A G T C C G T A A G C T C G A T A T G C G C A T A G T C C G T A T A G C A G T C A C G T T G A C
Reverse Opposite:
A C T G C G T A A C T G A T C G A C G T A C T G C G T A T A C G G C T A T C G A A C G T A C T G
p-value:1e-12
log p-value:-2.906e+01
Information Content per bp:1.754
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif8.57%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets110.1 +/- 49.9bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CATDCTCAVCTC
-ATTAACACCT-
 A G T C C G T A A G C T C G A T A T G C G C A T A G T C C G T A T A G C A G T C A C G T T G A C
A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CATDCTCAVCTC
--TTVACACCTH
 A G T C C G T A A G C T C G A T A T G C G C A T A G T C C G T A T A G C A G T C A C G T T G A C
A C G T A C G T A C G T G A C T T C A G C T G A G T A C C T G A T A G C A G T C G A C T G A T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CATDCTCAVCTC
---TGACACCT-
 A G T C C G T A A G C T C G A T A T G C G C A T A G T C C G T A T A G C A G T C A C G T T G A C
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T

ZKSCAN5/MA1652.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CATDCTCAVCTC----
--NNCTCACCTCCTNN
 A G T C C G T A A G C T C G A T A T G C G C A T A G T C C G T A T A G C A G T C A C G T T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A G C T G T A C A G C T A G T C T C G A G A T C A G T C A C G T A G T C G A T C G A C T A G T C G A T C

TBX18/MA1565.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CATDCTCAVCTC-
-NTTCACACCTCC
 A G T C C G T A A G C T C G A T A T G C G C A T A G T C C G T A T A G C A G T C A C G T T G A C A C G T
A C G T A G C T G A C T G C A T A T G C G T C A A G T C C T G A A G T C A G T C A G C T G A T C G A T C

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CATDCTCAVCTC
---TCACACCT-
 A G T C C G T A A G C T C G A T A T G C G C A T A G T C C G T A T A G C A G T C A C G T T G A C
A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CATDCTCAVCTC
--TTCACACCTT
 A G T C C G T A A G C T C G A T A T G C G C A T A G T C C G T A T A G C A G T C A C G T T G A C
A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CATDCTCAVCTC
---TCACACCT-
 A G T C C G T A A G C T C G A T A T G C G C A T A G T C C G T A T A G C A G T C A C G T T G A C
A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CATDCTCAVCTC
---TCACACCT-
 A G T C C G T A A G C T C G A T A T G C G C A T A G T C C G T A T A G C A G T C A C G T T G A C
A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CATDCTCAVCTC
-TTTCACACCT-
 A G T C C G T A A G C T C G A T A T G C G C A T A G T C C G T A T A G C A G T C A C G T T G A C
A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T