Information for 6-TTTATTTCAG (Motif 46)

A C G T A C G T A C G T C G T A G C A T A C G T C G A T A G T C C G T A A C T G
Reverse Opposite:
A G T C C G A T C T A G C G T A C G T A C G T A C G A T C G T A C G T A C G T A
p-value:1e-9
log p-value:-2.296e+01
Information Content per bp:1.872
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif8.57%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets134.6 +/- 35.5bp
Average Position of motif in Background70.6 +/- 3.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTTCAG
NTTTTATTGCNN
 A C G T A C G T A C G T A C G T A C G T C G T A G C A T A C G T C G A T A G T C C G T A A C T G
C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T

HOXD9/MA0913.2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTTCAG
NTTTTATTGC--
 A C G T A C G T A C G T A C G T A C G T C G T A G C A T A C G T C G A T A G T C C G T A A C T G
C T A G C A G T A C G T C G A T C G A T C G T A A G C T C A G T T C A G A G T C A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTTCAG
NTTTTATGAC--
 A C G T A C G T A C G T A C G T A C G T C G T A G C A T A C G T C G A T A G T C C G T A A C T G
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T

CDX4/MA1473.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTTCAG
GTTTTATTGCC-
 A C G T A C G T A C G T A C G T A C G T C G T A G C A T A C G T C G A T A G T C C G T A A C T G
T C A G C A G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G T C G T A C A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTTCAG
NTTTTATTACN-
 A C G T A C G T A C G T A C G T A C G T C G T A G C A T A C G T C G A T A G T C C G T A A C T G
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTTATTTCAG
TGTTTATTT---
 A C G T A C G T A C G T A C G T A C G T C G T A G C A T A C G T C G A T A G T C C G T A A C T G
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATTTCAG-
TNAATTTTATTACCTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T A C G T C G A T A G T C C G T A A C T G A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

Arid3a/MA0151.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTTATTTCAG
TTTAAT----
 A C G T A C G T A C G T C G T A G C A T A C G T C G A T A G T C C G T A A C T G
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTTCAG--
TTTTTTTTCNNGTN
 A C G T A C G T A C G T A C G T A C G T C G T A G C A T A C G T C G A T A G T C C G T A A C T G A C G T A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

ZNF384/MA1125.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTTATTTCAG-
TTTTTTTTTANN
 A C G T A C G T A C G T A C G T C G T A G C A T A C G T C G A T A G T C C G T A A C T G A C G T
C G A T C G A T C G A T C G A T G C A T G C A T C G A T G C A T C A G T G C T A C G T A G C T A