species:   Clros
pid:       PID2261
parent:    cro-mir-55
paralog:   
locus:     CADEHS020000009.2:1108259-1108304
matures:   ['AUGCCUGUCUGAGCGUCAUU', 'CAACCCUCAUGUCCCCGGAGCGUG']
srr:       ERR5950930
genome:    /Users/jax/+Genomes/Fungal_genomes/Clros.GCA_902827195.2_C_rosea_IK726_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5950930.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5950930.cram CADEHS020000009.2:1108259-1108304

21 out of bounds
1 alignments
0 proper strand
0 stranded perfect matches

********************************************* 
AUGCCUGUCUGAGCGUCAUUUCAACCCUCAUGUCCCCGGAGCGUGG
(((((((..((((.((.......)).))))......))).))))..
AUGCCUGUCUGAGCGUCAUU-------------------------- l=20 a=0 c
---------------------CAACCCUCAUGUCCCCGGAGCGUG- l=24 a=0 c*
AUGCCUGUCUGAGCGUCAUU-------------------------- l=20 a=0 ma
---------------------CAACCCUCAUGUCCCCGGAGCGUG- l=24 a=0 ma*


No alignments to locus

mb-01010
ax-1001011
ku-01
ss-100111001000
fn-001
