species:   Rhsol
pid:       PID0472
parent:    Rhi-milR-109
paralog:   
locus:     KB317801.1:21476-21549
matures:   ['UAGUAGCUGUUCUCUUAGGGGC', 'GCCUGGCCAGAGGGGAGUAAUGGAA']
srr:       SRR1994875
genome:    /Users/jax/+Genomes/Fungal_genomes/Rhsol.AFRT00000000.1_scaffolds.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Lin2016-hq.SRR1994875.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Lin2016-hq.SRR1994875.cram KB317801.1:21476-21549

4 out of bounds
1 alignments
0 proper strand
0 stranded perfect matches

         ****************************  *************************          
UUGACCAGGGUGCCUGGCCAGAGGGGAGUAAUGGAAUUCUUUUAGUAGCUGUUCUCUUAGGGGCUCAUUGUCCA
..(((..((((.((((...((((((.(((.((.(((....))).)).))).)))))))))).))))...)))..
------------------------------------------UAGUAGCUGUUCUCUUAGGGGC---------- l=22 a=0 c
-----------GCCUGGCCAGAGGGGAGUAAUGGAA-------------------------------------- l=25 a=0 c*
------------------------------------------UAGUAGCUGUUCUCUUAGGGGC---------- l=22 a=0 ma
-----------GCCUGGCCAGAGGGGAGUAAUGGAA-------------------------------------- l=25 a=0 ma*


No alignments to locus

mb-01011
ax-1001011
ku-01
ss-100111001100
fn-001
