species:   Cocin
pid:       PID1274
parent:    cci-milR-20
paralog:   
locus:     scaffold_23:129297-129349
matures:   ['UCUAUUUCAAUACUUCAUGCU', '']
srr:       SRR9972090
genome:    /Users/jax/+Genomes/Fungal_genomes/Cocin.Copci_AmutBmut1_AssemblyScaffolds.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Lau2020-gn.SRR9972090.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Lau2020-gn.SRR9972090.cram scaffold_23:129297-129349

0 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

**********************     **************************
AUGAAGCAUGAAAUAGACUUUCAUCAUGAAAGUCUAUUUCAAUACUUCAUGCU
((((((..(((((((((((((((...)))))))))))))))...))))))...
--------------------------------UCUAUUUCAAUACUUCAUGCU l=21 a=0 c
----------------------------------------------------- l=0 a=0 c*
--------------------------------UCUAUUUCAAUACUUCAUGCU l=21 a=0 ma
----------------------------------------------------- l=0 a=0 ma*


No alignments to locus

mb-00010
ax-0011010
ku-01
ss-000110011000
fn-001
