species:   Comil
pid:       PID1142
parent:    milR10
paralog:   
locus:     NW_006271970.1:3463964-3464031
matures:   ['GUGCUUGAGUUACCUGCCAGACAAAA', 'CUGUCCUGUUCGAGCAAGCGA']
srr:       SRR8054059
genome:    /Users/jax/+Genomes/Fungal_genomes/Comil.GCF_000225605.1_CmilitarisCM01_v01_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Shao2019-xf.SRR8054059.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Shao2019-xf.SRR8054059.cram NW_006271970.1:3463964-3464031

1 out of bounds
6 alignments
2 proper strand
0 stranded perfect matches

     ***********************       ****************************     
UGCCGCCCUGUCCUGUUCGAGCAAGCGAGAACCAGUCGUGCUUGAGUUACCUGCCAGACAAAACGGCG
.((((...((((.(((((((((..((((.......)))))))))))........))))))...)))).
-------------------------------------GUGCUUGAGUUACCUGCCAGACAAAA----- l=26 a=0 c
-------CUGUCCUGUUCGAGCAAGCGA---------------------------------------- l=21 a=0 c*
-------------------------------------GUGCUUGAGUUACCUGCCAGACAAAA----- l=26 a=0 ma
-------CUGUCCUGUUCGAGCAAGCGA---------------------------------------- l=21 a=0 ma*


No alignments to locus

mb-01011
ax-1001001
ku-01
ss-100010001000
fn-001
