species:   Clros
pid:       PID2233
parent:    cro-mir-28
paralog:   
locus:     CADEHS020000007.2:4439934-4439988
matures:   ['UAGAGACUCAGCUGUGGC', 'CCGAUUGAGAUCUGGUGGGG']
srr:       ERR5950923
genome:    /Users/jax/+Genomes/Fungal_genomes/Clros.GCA_902827195.2_C_rosea_IK726_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5950923.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5950923.cram CADEHS020000007.2:4439934-4439988

1 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

******************              ********************** 
UAGAGACUCAGCUGUGGCAAAAUCAGUAUUUUCCCCGAUUGAGAUCUGGUGGGGU
((((..(((((.((.((.(((((....))))).)))).))))).)))).......
UAGAGACUCAGCUGUGGC------------------------------------- l=18 a=0 c
----------------------------------CCGAUUGAGAUCUGGUGGGG- l=20 a=0 c*
UAGAGACUCAGCUGUGGC------------------------------------- l=18 a=0 ma
----------------------------------CCGAUUGAGAUCUGGUGGGG- l=20 a=0 ma*


No alignments to locus

mb-00011
ax-1001001
ku-01
ss-000010001000
fn-001
