species:   Comil
pid:       PID1152
parent:    milR20
paralog:   
locus:     NW_006271972.1:3864165-3864215
matures:   ['ACCCCACUGUCGCUGCCGAGC', 'UCACGAUGACAGAGGCAUCG']
srr:       SRR8054058
genome:    /Users/jax/+Genomes/Fungal_genomes/Comil.GCF_000225605.1_CmilitarisCM01_v01_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Shao2019-xf.SRR8054058.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Shao2019-xf.SRR8054058.cram NW_006271972.1:3864165-3864215

2 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

 **********************    *********************** 
GGCUCACGAUGACAGAGGCAUCGUUUUCGACCCCACUGUCGCUGCCGAGCC
(((((.((.((((((.((..(((....)))..)).)))))).))..)))))
-----------------------------ACCCCACUGUCGCUGCCGAGC- l=21 a=0 c
---UCACGAUGACAGAGGCAUCG---------------------------- l=20 a=0 c*
-----------------------------ACCCCACUGUCGCUGCCGAGC- l=21 a=0 ma
---UCACGAUGACAGAGGCAUCG---------------------------- l=20 a=0 ma*


No alignments to locus

mb-01011
ax-1001011
ku-01
ss-000110001100
fn-001
