species:   Fugra
pid:       PID1004
parent:    FgmilR-7dps-93
paralog:   
locus:     NC_026477.1:1567800-1567845
matures:   ['UCAUGUAGAACGAGUAUUAACC', 'UUAGACUCGUGUAAAAUGAAA']
srr:       SRR6516243
genome:    /Users/jax/+Genomes/Fungal_genomes/Fugra.GCF_000240135.3_ASM24013v3_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zeng2018-ds.SRR6516243.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zeng2018-ds.SRR6516243.cram NC_026477.1:1567800-1567845

6 out of bounds
1 alignments
1 proper strand
1 stranded perfect matches

**********************************************
CAUCAUGUAGAACGAGUAUUAACCUUUAGACUCGUGUAAAAUGAAA
..((((.....((((((.((((...)))))))))).....))))..
--UCAUGUAGAACGAGUAUUAACC---------------------- l=22 a=0 c
-------------------------UUAGACUCGUGUAAAAUGAAA l=21 a=0 c*
----------------UAUUAACCUUUAGACUCGUGU--------- l=21 a=1 ma
-------------------------UUAGACUCGUGUAAAAUGAAA l=21 a=0 ma*

----------------UAUUAACCUUUAGACUCGUGU--------- l=21 a=1 (ma)

mb-00010
ax-1001111
ku-01
ss-110111101110
fn-011
