species:   Drmel
pid:       MI0017694
parent:    dme-mir-4912
paralog:   
locus:     NT_033779.5:4829980-4830039
matures:   ['GUGAGUAGUCGUAUGUUUAUUAA', 'UAAAUUAAUGUCCACUACUUUUA']
srr:       SRR11906542
genome:    /Users/jax/+Genomes/Animal_genomes/Drmel.GCF_000001215.4_Release_6_plus_ISO1_MT_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906542.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906542.cram NT_033779.5:4829980-4830039

0 out of bounds
3 alignments
3 proper strand
3 stranded perfect matches

*********************             ************************* 
GUGAGUAGUCGUAUGUUUAUUAAGAUUUACUUUCUAUAAAUUAAUGUCCACUACUUUUAG
..(((((((.((((((((((..(((.......)))))))))..))).).)))))))....
GUGAGUAGUCGUAUGUUUAUUAA------------------------------------- l=23 a=0 c
------------------------------------UAAAUUAAUGUCCACUACUUUUA- l=23 a=0 c*
GUGAGUAGUCGUAUGUUUAUU--------------------------------------- l=21 a=2 ma
------------------------------------UAAAUUAAUGUCCACUACUUUUA- l=23 a=0 ma*

GUGAGUAGUCGUAUGUUUAU---------------------------------------- l=20 a=1 
GUGAGUAGUCGUAUGUUUAUU--------------------------------------- l=21 a=2 (ma)

mb-01011
ax-1011111
ku-01
ss-111111101110
fn-011
