<?xml version="1.0" ?><!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Archiving and Interchange DTD v1.3 20210610//EN"  "JATS-archivearticle1-mathml3.dtd"><article xmlns:ali="http://www.niso.org/schemas/ali/1.0/" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="research-article" dtd-version="1.3" xml:lang="en">
<front>
<journal-meta>
<journal-id journal-id-type="nlm-ta">elife</journal-id>
<journal-id journal-id-type="publisher-id">eLife</journal-id>
<journal-title-group>
<journal-title>eLife</journal-title>
</journal-title-group>
<issn publication-format="electronic" pub-type="epub">2050-084X</issn>
<publisher>
<publisher-name>eLife Sciences Publications, Ltd</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">100827</article-id>
<article-id pub-id-type="doi">10.7554/eLife.100827</article-id>
<article-id pub-id-type="doi" specific-use="version">10.7554/eLife.100827.3</article-id>
<article-version-alternatives>
<article-version article-version-type="publication-state">reviewed preprint</article-version>
<article-version article-version-type="preprint-version">1.4</article-version>
</article-version-alternatives>
<article-categories><subj-group subj-group-type="heading">
<subject>Neuroscience</subject>
</subj-group>
</article-categories><title-group>
<article-title>Neuromodulation with Ultrasound: Hypotheses on the Directionality of Effects and Community Resource</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Caffaratti</surname>
<given-names>Hugo</given-names>
</name>
<xref ref-type="aff" rid="a1">1</xref>
<email>hugoandres-caffaratti@uiowa.edu</email>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Slater</surname>
<given-names>Ben</given-names>
</name>
<xref ref-type="aff" rid="a2">2</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Shaheen</surname>
<given-names>Nour</given-names>
</name>
<xref ref-type="aff" rid="a1">1</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Rhone</surname>
<given-names>Ariane</given-names>
</name>
<xref ref-type="aff" rid="a1">1</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Calmus</surname>
<given-names>Ryan</given-names>
</name>
<xref ref-type="aff" rid="a1">1</xref>
<xref ref-type="aff" rid="a2">2</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Kritikos</surname>
<given-names>Michael</given-names>
</name>
<xref ref-type="aff" rid="a1">1</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Kumar</surname>
<given-names>Sukhbinder</given-names>
</name>
<xref ref-type="aff" rid="a1">1</xref>
</contrib>
<contrib contrib-type="author">
<contrib-id contrib-id-type="orcid">http://orcid.org/0000-0001-6724-688X</contrib-id>
<name>
<surname>Dlouhy</surname>
<given-names>Brian</given-names>
</name>
<xref ref-type="aff" rid="a1">1</xref>
</contrib>
<contrib contrib-type="author">
<contrib-id contrib-id-type="orcid">http://orcid.org/0000-0002-1733-5478</contrib-id>
<name>
<surname>Oya</surname>
<given-names>Hiroyuki</given-names>
</name>
<xref ref-type="aff" rid="a1">1</xref>
</contrib>
<contrib contrib-type="author">
<contrib-id contrib-id-type="orcid">http://orcid.org/0000-0001-8066-4381</contrib-id>
<name>
<surname>Griffiths</surname>
<given-names>Tim</given-names>
</name>
<xref ref-type="aff" rid="a1">1</xref>
<xref ref-type="aff" rid="a2">2</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Boes</surname>
<given-names>Aaron D</given-names>
</name>
<xref ref-type="aff" rid="a4">4</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Trapp</surname>
<given-names>Nicholas</given-names>
</name>
<xref ref-type="aff" rid="a4">4</xref>
</contrib>
<contrib contrib-type="author">
<contrib-id contrib-id-type="orcid">http://orcid.org/0000-0002-4654-3110</contrib-id>
<name>
<surname>Kaiser</surname>
<given-names>Marcus</given-names>
</name>
<xref ref-type="aff" rid="a5">5</xref>
<xref ref-type="aff" rid="a6">6</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Sallet</surname>
<given-names>Jérôme</given-names>
</name>
<xref ref-type="aff" rid="a7">7</xref>
<xref ref-type="aff" rid="a8">8</xref>
</contrib>
<contrib contrib-type="author">
<contrib-id contrib-id-type="orcid">http://orcid.org/0000-0002-1936-7529</contrib-id>
<name>
<surname>Banks</surname>
<given-names>Matthew I</given-names>
</name>
<xref ref-type="aff" rid="a9">9</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Howard</surname>
<given-names>Matthew A</given-names>
<suffix>III</suffix></name>
<xref ref-type="aff" rid="a1">1</xref>
</contrib>
<contrib contrib-type="author" equal-contrib="yes" corresp="yes">
<name>
<surname>Zanaty</surname>
<given-names>Mario</given-names>
</name>
<xref ref-type="aff" rid="a1">1</xref>
<xref ref-type="author-notes" rid="n1">*</xref>
<email>mario-zanaty@uiowa.edu</email>
</contrib>
<contrib contrib-type="author" equal-contrib="yes" corresp="yes">
<name>
<surname>Petkov</surname>
<given-names>Christopher I</given-names>
</name>
<xref ref-type="aff" rid="a1">1</xref>
<xref ref-type="aff" rid="a2">2</xref>
<xref ref-type="aff" rid="a3">3</xref>
<xref ref-type="author-notes" rid="n1">*</xref>
<email>cipetkov@uiowa.edu</email>
</contrib>
<aff id="a1"><label>1</label><institution-wrap><institution-id institution-id-type="ror">https://ror.org/036jqmy94</institution-id><institution>Department of Neurosurgery, University of Iowa</institution></institution-wrap>, <city>Iowa City</city>, <country country="US">United States</country></aff>
<aff id="a2"><label>2</label><institution-wrap><institution-id institution-id-type="ror">https://ror.org/01kj2bm70</institution-id><institution>Biosciences Institute, Newcastle University Medical School</institution></institution-wrap>, <city>Newcastle upon Tyne</city>, <country country="GB">United Kingdom</country></aff>
<aff id="a3"><label>3</label><institution-wrap><institution-id institution-id-type="ror">https://ror.org/036jqmy94</institution-id><institution>Iowa Neuroscience Institute, University of Iowa</institution></institution-wrap>, <city>Iowa City</city>, <country country="US">United States</country></aff>
<aff id="a4"><label>4</label><institution-wrap><institution-id institution-id-type="ror">https://ror.org/036jqmy94</institution-id><institution>Department of Psychiatry, University of Iowa</institution></institution-wrap>, <city>Iowa City</city>, <country country="US">United States</country></aff>
<aff id="a5"><label>5</label><institution-wrap><institution-id institution-id-type="ror">https://ror.org/01ee9ar58</institution-id><institution>NIHR Biomedical Research Centre, School of Medicine, University of Nottingham</institution></institution-wrap>, <city>Nottingham</city>, <country country="GB">United Kingdom</country></aff>
<aff id="a6"><label>6</label><institution-wrap><institution-id institution-id-type="ror">https://ror.org/0220qvk04</institution-id><institution>Rui Jin Hospital, Shanghai Jiao Tong University</institution></institution-wrap>, <city>Shanghai</city>, <country country="CN">China</country></aff>
<aff id="a7"><label>7</label><institution-wrap><institution-id institution-id-type="ror">https://ror.org/01rk35k63</institution-id><institution>Stem Cell and Brain Research Institute, INSERM U1208, University of Lyon</institution></institution-wrap>, <city>Lyon</city>, <country country="FR">France</country></aff>
<aff id="a8"><label>8</label><institution-wrap><institution-id institution-id-type="ror">https://ror.org/052gg0110</institution-id><institution>Department of Experimental Psychology, University of Oxford</institution></institution-wrap>, <city>Oxford</city>, <country country="GB">United Kingdom</country></aff>
<aff id="a9"><label>9</label><institution-wrap><institution-id institution-id-type="ror">https://ror.org/01y2jtd41</institution-id><institution>Department of Anesthesiology, University of Wisconsin at Madison</institution></institution-wrap>, <city>Madison</city>, <country country="US">United States</country></aff>
</contrib-group>
<contrib-group content-type="section">
<contrib contrib-type="editor">
<name>
<surname>Chait</surname>
<given-names>Maria</given-names>
</name>
<role>Reviewing Editor</role>
<aff>
<institution-wrap>
<institution-id institution-id-type="ror">https://ror.org/02jx3x895</institution-id><institution>University College London</institution>
</institution-wrap>
<city>London</city>
<country country="GB">United Kingdom</country>
</aff>
</contrib>
<contrib contrib-type="senior_editor">
<name>
<surname>Shinn-Cunningham</surname>
<given-names>Barbara G</given-names>
</name>
<role>Senior Editor</role>
<aff>
<institution-wrap>
<institution-id institution-id-type="ror">https://ror.org/05x2bcf33</institution-id><institution>Carnegie Mellon University</institution>
</institution-wrap>
<city>Pittsburgh</city>
<country country="US">United States</country>
</aff>
</contrib>
</contrib-group>
<author-notes>
<fn fn-type="equal" id="n1"><label>*</label><p>joint senior authors</p></fn>
<fn fn-type="coi-statement"><p>Competing interests: No competing interests declared</p></fn>
</author-notes>
<pub-date date-type="original-publication" iso-8601-date="2024-12-06">
<day>06</day>
<month>12</month>
<year>2024</year>
</pub-date>
<pub-date date-type="update" iso-8601-date="2025-10-22">
<day>22</day>
<month>10</month>
<year>2025</year>
</pub-date>
<volume>13</volume>
<elocation-id>RP100827</elocation-id>
<history>
<date date-type="sent-for-review" iso-8601-date="2024-07-07">
<day>07</day>
<month>07</month>
<year>2024</year>
</date>
</history>
<pub-history>
<event>
<event-desc>Preprint posted</event-desc>
<date date-type="preprint" iso-8601-date="2024-06-15">
<day>15</day>
<month>06</month>
<year>2024</year>
</date>
<self-uri content-type="preprint" xlink:href="https://doi.org/10.1101/2024.06.14.24308829"/>
</event>
<event>
<event-desc>Reviewed preprint v1</event-desc>
<date date-type="reviewed-preprint" iso-8601-date="2024-12-06">
<day>06</day>
<month>12</month>
<year>2024</year>
</date>
<self-uri content-type="reviewed-preprint" xlink:href="https://doi.org/10.7554/eLife.100827.1"/>
<self-uri content-type="editor-report" xlink:href="https://doi.org/10.7554/eLife.100827.1.sa2">eLife Assessment</self-uri>
<self-uri content-type="referee-report" xlink:href="https://doi.org/10.7554/eLife.100827.1.sa1">Reviewer #1 (Public review):</self-uri>
<self-uri content-type="referee-report" xlink:href="https://doi.org/10.7554/eLife.100827.1.sa0">Reviewer #2 (Public review):</self-uri>
</event>
<event>
<event-desc>Reviewed preprint v2</event-desc>
<date date-type="reviewed-preprint" iso-8601-date="2025-07-09">
<day>09</day>
<month>07</month>
<year>2025</year>
</date>
<self-uri content-type="reviewed-preprint" xlink:href="https://doi.org/10.7554/eLife.100827.2"/>
<self-uri content-type="editor-report" xlink:href="https://doi.org/10.7554/eLife.100827.2.sa2">eLife Assessment</self-uri>
<self-uri content-type="referee-report" xlink:href="https://doi.org/10.7554/eLife.100827.2.sa1">Reviewer #1 (Public review):</self-uri>
<self-uri content-type="author-comment" xlink:href="https://doi.org/10.7554/eLife.100827.2.sa0">Author response:</self-uri>
</event>
</pub-history>
<permissions>
<copyright-statement>© 2024, Caffaratti et al</copyright-statement>
<copyright-year>2024</copyright-year>
<copyright-holder>Caffaratti et al</copyright-holder>
<ali:free_to_read/>
<license xlink:href="https://creativecommons.org/licenses/by/4.0/">
<ali:license_ref>https://creativecommons.org/licenses/by/4.0/</ali:license_ref>
<license-p>This article is distributed under the terms of the <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution License</ext-link>, which permits unrestricted use and redistribution provided that the original author and source are credited.</license-p>
</license>
</permissions>
<self-uri content-type="pdf" xlink:href="elife-preprint-100827-v3.pdf"/>
<abstract>
<p>Low-intensity Transcranial Ultrasound Stimulation is a promising non-invasive technique for brain stimulation and focal neuromodulation. Research with humans and animal models has raised the possibility that TUS can be biased towards enhancing or suppressing neural function. Here, we first collate a set of hypotheses on the directionality of TUS effects and conduct an initial meta-analysis on available healthy human participant TUS studies reporting stimulation parameters and outcomes (<italic>n =</italic> 47 studies, 52 experiments). In initial exploratory analyses with univariate tests, we find that parameters such as the intensity and continuity of stimulation (duty cycle) show statistical trends towards likely TUS neural enhancement or suppression of function. Machine-learning analyses were limited by the currently small sample size. Given that human TUS sample sizes are expected to increase, predictability on the directionality of TUS effects could improve if a database is available. Therefore, we establish an <italic>inTUS</italic> database and resource for the systematic reporting of TUS parameters and outcomes to assist in greater precision in TUS use for brain stimulation and neuromodulation. The paper concludes with a selective review of human clinical TUS studies illustrating how hypotheses on the directionality of TUS effects could be developed for empirical testing in the intended clinical application, not limited to the examples provided.</p>
</abstract>
<abstract abstract-type="summary">
<title>Highlights</title>
<list list-type="bullet">
<list-item><p>Collated set of hypotheses on using TUS to bias towards neural enhancement or suppression</p></list-item>
<list-item><p>Meta-analysis results identify parameters that may bias directionality of TUS effects</p></list-item>
<list-item><p><italic>inTUS</italic> resource established for systematic reporting of TUS parameters and outcomes</p></list-item>
<list-item><p>Selective review of patient TUS studies for enhancing or suppressing neural function</p></list-item>
</list>
</abstract>
<kwd-group kwd-group-type="author">
<title>Keywords</title>
<kwd>Non-invasive brain stimulation</kwd>
<kwd>focused ultrasound stimulation</kwd>
<kwd>low intensity</kwd>
<kwd>neuromodulation</kwd>
<kwd>excitation</kwd>
<kwd>inhibition</kwd>
<kwd>suppression</kwd>
<kwd>clinical application</kwd>
</kwd-group>
<custom-meta-group>
<custom-meta specific-use="meta-only">
<meta-name>publishing-route</meta-name>
<meta-value>prc</meta-value>
</custom-meta>
</custom-meta-group>
</article-meta>
<notes>
<notes notes-type="disclosures">
<title>Author Declarations</title><p>I confirm all relevant ethical guidelines have been followed, and any necessary IRB and/or ethics committee approvals have been obtained.</p><p>Yes</p><p>I confirm that all necessary patient/participant consent has been obtained and the appropriate institutional forms have been archived, and that any patient/participant/sample identifiers included were not known to anyone (e.g., hospital staff, patients or participants themselves) outside the research group so cannot be used to identify individuals.</p><p>Yes</p><p>I understand that all clinical trials and any other prospective interventional studies must be registered with an ICMJE-approved registry, such as ClinicalTrials.gov. I confirm that any such study reported in the manuscript has been registered and the trial registration ID is provided (note: if posting a prospective study registered retrospectively, please provide a statement in the trial ID field explaining why the study was not registered in advance).</p><p>Yes</p><p>I have followed all appropriate research reporting guidelines, such as any relevant EQUATOR Network research reporting checklist(s) and other pertinent material, if applicable.</p><p>Yes</p></notes>
<fn-group content-type="summary-of-updates">
<title>Summary of Updates:</title>
<fn fn-type="update"><p>We have made some paragraphs more concise and clear. We have clarified some important concepts.</p></fn>
</fn-group>
</notes>
</front>
<body>
<sec id="s1">
<title>Introduction</title>
<p>In the last decade, low-intensity focused Transcranial Ultrasound Stimulation (TUS) has emerged as a promising non-invasive brain stimulation technique for neuromodulation in research and clinical settings. TUS uses sound waves—in the sub-MHz range—that pass through the skull to deliver focal acoustic energy onto a targeted brain area. Compared to other more established non-invasive brain stimulation techniques, such as Transcranial Magnetic Stimulation (TMS), transcranial Direct Current Stimulation (tDCS) or transcranial Alternating Current Stimulation (tACS), TUS offers several advantages: i) focal deep brain targeting (<xref rid="fig1" ref-type="fig">Fig. 1</xref>); ii) multi-target, including bi-hemispheric, stimulation capabilities; and, iii) neuromodulatory effects that can last tens of milliseconds to hours after the sonication period has ended (<xref ref-type="bibr" rid="c14">Blackmore et al., 2023</xref>; <xref ref-type="bibr" rid="c34">Deffieux et al., 2015</xref>; <xref ref-type="bibr" rid="c35">Deffieux et al., 2013</xref>; <xref ref-type="bibr" rid="c87">Legon et al., 2014</xref>; <xref ref-type="bibr" rid="c109">Mueller et al., 2014</xref>). The neural effects of TUS depend on factors including the intensity and duration of the stimulating acoustic wave. In this review, we primarily focus on <italic>low-intensity</italic> TUS as used for neuromodulation (typically &lt;50 W/cm<sup>2)</sup>; (<xref ref-type="bibr" rid="c82">Lee et al., 2021</xref>; <xref ref-type="bibr" rid="c112">Murphy et al., 2024</xref>) with some consideration of <italic>moderate-intensity applications</italic> (&gt;190 W/cm<sup>2</sup>) used for perturbing the blood-brain barrier (<xref ref-type="bibr" rid="c70">Kim et al., 2021</xref>; <xref ref-type="bibr" rid="c141">Spivak et al., 2022</xref>; T. <xref ref-type="bibr" rid="c173">Zhang et al., 2021</xref>) and <italic>high-intensity focused ultrasound</italic> (up to 10,000 W/cm<sup>2</sup>) used for clinical thermal ablation in neurosurgery patients (<xref ref-type="bibr" rid="c175">Zhou, 2011</xref>). The duration of TUS stimulation and its effects is a key factor, with immediate effects during TUS stimulation referred to as ‘online’ effects and those that can last after TUS stimulation referred to as ‘offline’ effects.</p>
<fig id="fig1" position="float" orientation="portrait" fig-type="figure">
<label>Figure 1.</label>
<caption><title>Schematic overview of the specificity of brain perturbation techniques.</title>
<p>Brain perturbation techniques vary in the precision of the spatial and temporal effects that can be elicited, on logarithmic (log10) scales. This includes transcranial Focused Ultrasound Stimulation (TUS), in green. Some approaches with cellular specificity are shown that are currently primarily in use with nonhuman animals as models (optogenetics, infrared neuromodulation, chemogenetics and genetic manipulation). Figure modified with permission from P.C. Klink, from (<xref ref-type="bibr" rid="c72">Klink et al., 2021</xref>).</p></caption>
<graphic xlink:href="24308829v4_fig1.tif" mimetype="image" mime-subtype="tiff"/>
</fig>
<fig id="fig2" position="float" orientation="portrait" fig-type="figure">
<label>Figure 2.</label>
<caption><title>Low-intensity Transcranial Ultrasound Stimulation for Neuromodulation in Humans.</title>
<p>(A, B, C) Example focal TUS targeting of a human motor cortex using k-plan software (BrainBox, Inc.). (D) TUS simulation software uses an input set of parameters (e.g., pulse duration, sonication duration, pulse repetition frequency, transducer fundamental frequency, intensity in water (ISSPA)) to simulate and calculate the estimated TUS intensity in the target brain region using the participant’s MRI and CT scans if available, or template human brain and CT scans. Simulation software will also generate the complete set of minimal parameters for reporting.</p></caption>
<graphic xlink:href="24308829v4_fig2.tif" mimetype="image" mime-subtype="tiff"/>
</fig>
<p>Ultrasound for clinical imaging or thermal ablation has a long history (<xref ref-type="bibr" rid="c50">Fry et al., 1951</xref>; <xref ref-type="bibr" rid="c51">Fry et al., 1950</xref>; <xref ref-type="bibr" rid="c53">Gavrilov, 1974</xref>). However, low-intensity ultrasound for neuromodulation remains a relatively nascent approach for non-invasive brain stimulation. Therefore, much remains to be understood about the mechanisms of TUS neuromodulation. Yet, considerable research progress has been made with TUS in humans and nonhuman animal models, narrowing the range of possible mechanistic hypotheses.</p>
<sec id="s1a">
<title>Candidate mechanisms for TUS neuromodulation</title>
<p>Low intensity TUS in animal models has been shown to interact with neural tissue via mechanical effects. The sonication wave either directly changes the permeability of ion channels within neuronal membranes, such as voltage-gated sodium, calcium and potassium channels (e.g., K2P, TRP and Piezo1), or it temporary mechanically alters the cell membrane properties (<xref ref-type="bibr" rid="c90">Liao et al., 2021</xref>). Several mechanisms have been proposed, including changes in membrane turgidity and the dynamics of lipid microdomains (<xref ref-type="bibr" rid="c4">Anishkin et al., 2014</xref>; <xref ref-type="bibr" rid="c7">Babakhanian et al., 2018</xref>; <xref ref-type="bibr" rid="c122">Petersen et al., 2016</xref>; <xref ref-type="bibr" rid="c145">Suki et al., 2020</xref>; <xref ref-type="bibr" rid="c153">Tyler, 2011</xref>). TUS also affects the coupling between neurons and glial cells (<xref ref-type="bibr" rid="c117">Oh et al., 2019</xref>). The combination of TUS mechanical effects tends to increase action potentials being elicited by excitatory and inhibitory neurons (<xref ref-type="bibr" rid="c153">Tyler, 2011</xref>; <xref ref-type="bibr" rid="c162">Yoo et al., 2022</xref>). TUS has been shown to be capable of inducing muscle contraction and limb or tail flicking when rodent motor cortex is stimulated with low to moderate intensities (<xref ref-type="bibr" rid="c69">Kim et al., 2020</xref>; <xref ref-type="bibr" rid="c79">Lee et al., 2018</xref>; <xref ref-type="bibr" rid="c152">Tufail et al., 2010</xref>). Similar motor responses have yet to be observed and reported in human and non-human primates (<xref ref-type="bibr" rid="c32">Darmani et al., 2022</xref>).</p>
<p>At low intensities for neuromodulation, TUS can influence neural tissue without causing substantial damage, heating or adverse effects, as reported in human and non-human primates (<xref ref-type="bibr" rid="c52">Gaur et al., 2020</xref>; <xref ref-type="bibr" rid="c140">Spivak et al., 2021</xref>; <xref ref-type="bibr" rid="c154">Verhagen et al., 2019</xref>). However, care should be taken with continuous stimulation protocols where the continuity of stimulation (duty cycle; see <xref rid="tblb1" ref-type="table">Box 1</xref>) is high (<xref ref-type="bibr" rid="c130">Roumazeilles et al., 2021</xref>; <xref ref-type="bibr" rid="c154">Verhagen et al., 2019</xref>). Overall, TUS does not appear to cause significant heating or cavitation of brain tissue when the intensity remains low, based on Mechanical and Thermal Index values and recommendations of use (see <xref rid="tblb1" ref-type="table">Box 1</xref> and <xref rid="tblb2" ref-type="table">2</xref>). Temperature changes for low-intensity TUS are commonly &lt;1°C (<xref ref-type="bibr" rid="c9">Baek et al., 2017</xref>; <xref ref-type="bibr" rid="c163">Yoo et al., 2011</xref>), and thermal effects could at least minimally alter cell membrane capacitance during ‘online’ TUS. However, thermal effects alone are unlikely to play a considerable role for longer-lasting ‘offline’ TUS effects (<xref ref-type="bibr" rid="c118">Ozenne et al., 2020</xref>; <xref ref-type="bibr" rid="c154">Verhagen et al., 2019</xref>). The mechanism of action for the longer-lasting offline effects is not yet well understood. Because the offline effects can last tens of minutes, or in some cases hours, after the sonication period (Bault et al., 2023; Pasquinelli et al., 2019), offline effects likely engage neuroplasticity mechanisms, such as modulation of AMPA and NMDA glutamatergic receptors and post-synaptic Ca<sup>2+</sup> mediated changes to receptor properties. Interestingly, TUS effects on neuronal NMDA receptors appear to be indirect via, for instance, TUS modulation of astrocytes that can influence neuronal plasticity (<xref ref-type="bibr" rid="c14">Blackmore et al., 2023</xref>). TUS pulsed at a theta (4-8 Hz) frequency (theta-burst TUS; tb-TUS) is being studied for its capability to induce LTP-like plasticity (<xref ref-type="bibr" rid="c33">Darmani et al., 2025</xref>; <xref ref-type="bibr" rid="c116">Oghli et al., 2023</xref>; <xref ref-type="bibr" rid="c132">Samuel et al., 2023</xref>; <xref ref-type="bibr" rid="c133">Samuel et al., 2022</xref>; <xref ref-type="bibr" rid="c168">Zeng et al., 2022</xref>). We further consider tb-TUS as part of ‘offline’ stimulation protocols at the end of section (I) below. Of importance for future clinical applications, the repeated use of TUS sessions does not appear to negatively impact on the integrity of brain tissue as assessed by MRI (<xref ref-type="bibr" rid="c111">Munoz et al., 2022</xref>).</p>
</sec>
<sec id="s1b">
<title>Directionality of TUS neuromodulation</title>
<p>There is substantial interest in understanding the conditions under which TUS could be used to bias the directionality of neuromodulatory effects on the targeted brain area and its network or on behavior (<xref ref-type="bibr" rid="c14">Blackmore et al., 2023</xref>; <xref ref-type="bibr" rid="c106">Mihran et al., 1990</xref>; <xref ref-type="bibr" rid="c151">Tsui et al., 2005</xref>; <xref ref-type="bibr" rid="c172">Zhang et al., 2023</xref>). To describe the directionality of neural effects, we use the terms enhancement or suppression throughout, reserving the terms excitation and inhibition for references to reports where it was possible to directly record from identified excitatory and inhibitory neurons with animal models.</p>
<p>Recordings from identified excitatory and inhibitory neurons during TUS with animal models provide important mechanistic insights, because the neuronal recordings can be combined with causal manipulation, such as blocking specific ion channels. For instance, previous studies with murine models have reported that short Sonication Durations (SD, &lt;1 sec) can lead to net neural excitation (attributed to more action potentials being elicited by TUS in excitatory neurons), whereas longer sonication durations (&gt; 1 sec) can lead to net neural suppression (i.e., more strongly driving inhibitory neurons) (<xref ref-type="bibr" rid="c106">Mihran et al., 1990</xref>; <xref ref-type="bibr" rid="c151">Tsui et al., 2005</xref>). Other TUS studies have suggested that higher sonication Pulse Repetition Frequencies (PRF &gt;100 Hz) can lead to net excitation (<xref ref-type="bibr" rid="c100">Manuel et al., 2020</xref>; <xref ref-type="bibr" rid="c172">Zhang et al., 2023</xref>). The caveat is that many nonhuman animal studies are conducted under anesthesia, which can alter the balance of excitatory-inhibitory neuronal activity. By comparison, although human TUS studies are often conducted without anesthesia, access to single units (neurons) is only possible with specialist FDA or ethical board approved electrodes for clinical monitoring in neurosurgery patients, with which it is difficult or not possible to identify the recorded cell types. Moreover, there is a paucity of direct neuronal recording studies in humans during TUS.</p>
<p>Researchers with other non-invasive brain stimulation approaches, including TMS, are working to overcome similar challenges in identifying the directionality of effects on neurons and neuronal networks (<xref ref-type="bibr" rid="c45">Fitzgerald et al., 2006</xref>). TMS researchers now regularly apply higher duty cycles to tip the directionality of TMS neuromodulatory effects on cortical areas towards net excitation (i.e., potentiation). By contrast, low-duty cycle TMS pulses are associated with net inhibition (i.e., de-potentiation or suppression) of muscle potentials or motor cortical responses (<xref ref-type="bibr" rid="c139">Solomon et al., 2024</xref>). Therefore, although the effects of TMS and TUS on neurons and neural systems differ, a certain level of correspondence between the two techniques may be found, even if it is not expected, in parameters such as duty cycle causing net excitation or suppression of neural network function.</p>
<p>Research into TUS mechanisms and effects is informing computational modeling, which allows the more systematic exploration of TUS stimulation parameters, difficult to achieve with any one empirical study alone. In a computational <italic>Neuronal Intramembrane Cavitation Excitation</italic> (NICE) model developed to study activation and suppression effects on modeled excitatory and inhibitory neuronal populations, TUS effects were simulated as intramembrane cavitation causing changes in ion channel conductivity (<xref ref-type="bibr" rid="c123">Plaksin et al., 2016</xref>). Although it remains questionable whether intramembrane cavitation is a key mechanism for TUS, the NICE model stimulation simulation approach can be viewed as general and it allowed the researchers to simulate a broad set of TUS parameters, including TUS intensity and the continuity of stimulation (duty cycle), on modelled neuronal responses.</p>
<p><xref rid="tblb1" ref-type="table">Box 1</xref> summarizes the common TUS parameters and their measuring units. Key parameters are the average acoustic intensity (intensity spatial peak pulse average, ISPPA), intensity spatial peak time average (ISPTA), sonication duration, duty cycle (DC), pulse repetition frequency (PRF), thermal index (TI) and mechanical index (MI). <xref rid="tblb2" ref-type="table">Box 2</xref> shows guidelines on the ultrasound parameter limits that human low-intensity TUS studies typically follow.</p>
<table-wrap id="tblb1" orientation="portrait" position="float">
<label>Box 1.</label>
<caption><title>Transcranial focused ultrasound stimulation (TUS) key parameters.</title><p>Shown are the abbreviations and measurement value definitions for TUS parameters.</p></caption>
<graphic xlink:href="24308829v4_tblb1.tif" mimetype="image" mime-subtype="tiff"/>
</table-wrap>
<table-wrap id="tblb2" orientation="portrait" position="float">
<label>Box 2.</label>
<caption><title>TUS recommendations.</title><p>The International Transcranial Ultrasonic Stimulation Safety and Standards (ITRUSST) consortium has recently established recommendations based on existing guidelines for diagnostic ultrasound from regulatory bodies such as the Food and Drug Administration (FDA), the British Medical Ultrasound Society (BMUS) and the American Institute of Ultrasound in Medicine (AIUM). Some in the community might follow the FDA guidelines for diagnostic ultrasound, see <xref rid="tblb1" ref-type="table">Box 1</xref> for a description of these parameters. The ITRUSST consortium concurs with the FDA limits on MI, but differs on the importance placed on the intensity (ISPPA/ISPTA) parameters independently of consideration of the TI (noted by * in the box above). Namely, ITRUSST recommends that the thermal maximal exposure is ≤ 2° Celsius at any time, the thermal dose is ≤ 0.25 CEM43 or the maximum exposure time is also considered (e.g., 10 sec 5.0 &lt; TI ≤ 6.0), please see (<xref ref-type="bibr" rid="c6">Aubry et al., 2023</xref>). Importantly, the ITRUSST recommendations should be considered in parallel to individualized simulations and measurement of thermal effects to further reduce the risk of adverse effects.</p></caption>
<graphic xlink:href="24308829v4_tblb2.tif" mimetype="image" mime-subtype="tiff"/>
</table-wrap>
<p>The NICE model was initially evaluated with a more limited set of the previously available data from human and nonhuman animal studies, and the model at that time showed a high level of predictability, albeit with a very small sampling of studies available for comparison. Increases in intensity (ISPPA, <xref rid="tblb1" ref-type="table">Box 1</xref>) and duty cycle (DC, <xref rid="tblb1" ref-type="table">Box 1</xref>) were argued to be able to tip the balance from suppression to activation in the modeled populations of excitatory and inhibitory neurons (<xref ref-type="bibr" rid="c123">Plaksin et al., 2016</xref>). Several reviews have now conducted case-by-case and ad-hoc comparisons of TUS parameters with the NICE model predictions, with mixed support for the NICE model (<xref ref-type="bibr" rid="c2">Ai et al., 2018</xref>; <xref ref-type="bibr" rid="c36">Dell’Italia et al., 2022</xref>; <xref ref-type="bibr" rid="c49">Forster et al., 2023b</xref>; <xref ref-type="bibr" rid="c172">Zhang et al., 2023</xref>). In <xref rid="tblb3" ref-type="table">Box 3</xref>, we collate a set of net enhancement versus suppression hypotheses linked to TUS parameters that may be able to bias the directionality of neural effects. These hypotheses are generated by the animal research studies discussed in this section. Therefore, the hypotheses are not solely generated by the NICE model and are further considered in Section I on the meta-analysis and resource provided as part of this report.</p>
<table-wrap id="tblb3" orientation="portrait" position="float">
<label>Box 3.</label>
<caption><title>Net enhancement versus suppression hypotheses.</title><p>Summarized hypotheses on how net enhancement or suppression could be biased with TUS parameters. Note that the threshold for ISPPA qualifying as ‘higher’ or ‘lower’ intensity is currently poorly understood or may non-linearly interact with other factors such as Duty Cycle (<xref ref-type="bibr" rid="c123">Plaksin et al., 2016</xref>; <xref ref-type="bibr" rid="c124">Plaksin et al., 2014</xref>). A similar set of uncertainty in the directionality and border exists for the other parameters, here defined as falsifiable hypotheses.</p></caption>
<graphic xlink:href="24308829v4_tblb3.tif" mimetype="image" mime-subtype="tiff"/>
</table-wrap>
<p>The uncertainty about the extent to which TUS can be used to enhance or suppress neurobiological function limits its research potential (<xref ref-type="bibr" rid="c25">Chen et al., 1997</xref>; <xref ref-type="bibr" rid="c45">Fitzgerald et al., 2006</xref>). Rather than exploring the TUS parameter space, many researchers opt to emulate the TUS parameters of prior studies reporting specific positive findings, limiting the necessary exploration of the entire parameter space necessary for a nascent field and contributing to an empirical and reporting bias. We recognize the complexity of neural circuits and systems and the limitations in aiming to evaluate predictions with a relative paucity of data in humans. However, we also recognize that stepwise progress and evaluation are needed as signposts in this research endeavor, not unique to TUS or other brain perturbation approaches with longer histories of use, e.g., invasive deep-brain electrical stimulation, TMS, tACS, tDCS; see <xref rid="fig1" ref-type="fig">Fig. 1</xref> (<xref ref-type="bibr" rid="c37">Derosiere et al., 2020</xref>; <xref ref-type="bibr" rid="c72">Klink et al., 2021</xref>). Therefore, since there are now many tens of human TUS studies (<xref rid="fig3" ref-type="fig">Figure 3</xref>), to us it seems the time is ripe for further research signposts and a database to be established as an open resource that can help to accommodate growth in the field. There are now a range of reported behavioral and neurobiological outcomes with human TUS, ranging from eliciting somatosensory sensations with TUS applied to the somatosensory cortex, the enhancement or suppression of the threshold for motor-evoked potentials (MEPs) with TUS applied to motor cortex (including in combination with TMS), the perception of visual phosphenes or modulation of visual motion perception from TUS applied to the visual cortex, and mood improvement induced by TUS to the prefrontal cortex (these and others are summarized in <xref rid="tbl1" ref-type="table">Tables 1-3</xref>). With the accumulation of these and other human low-intensity TUS data, a more extensive review and meta-analysis than previously possible can now be conducted. This could be a needed step towards the next key evaluation period when samples sizes increase.</p>
<fig id="fig3" position="float" orientation="portrait" fig-type="figure">
<label>Figure 3.</label>
<caption><title>Meta-analysis selection and inclusion criteria using the PRISMA recommended approach.</title>
<p>Selection and inclusion criteria for the meta-analysis with resulting sample sizes for the meta-analysis.</p></caption>
<graphic xlink:href="24308829v4_fig3.tif" mimetype="image" mime-subtype="tiff"/>
</fig>
<table-wrap id="tbl1" orientation="portrait" position="float">
<label>Table 1.</label>
<caption><title>Human ‘online’ TUS studies categorized by probable enhancement or suppression.</title><p>Summarized are the TUS parameters reported in the human studies (inTUS_DATABASE_1-2025.csv) and their reported neurobiological effects categorized by likely excitatory or inhibitory effects. For independently confirmed effects, we cite the independent assessment source. <italic>Abbreviations of Brain Targets:</italic> Somatosensory Cortex (S1,S2); Primary Visual Cortex (V1); Primary Motor Cortex (M1); Ventro-Lateral Prefrontal Cortex (VLPFC); Ventral Capsule/Ventral Striatum (VC/VS); dorsal-Anterior Cingulate Cortex (dACC); Orbito Frontal Cortex (OFC); Thalamus-Ventral Posterolateral Nucleus (VPL); human Middle Temporal Area (hMT+); Nucleus Accumbens (NAcc); Medial Prefrontal Cortex (mPFCF); Anterior Insula (AI); Posterior Insula (PI); Entorhinal Cortex (ErC); <italic>Abbreviations of Measurements:</italic> Heartbeat Evoked Potential (HEP); Contact Heat Evoked Potential (CHEP); Heart Rate Variability (HRV); Transcranial Magnetic Stimulation (TMS); Short-Interval Intracortical Inhibition (SICI); Intracortical Facilitation (ICF); rs-fMRI (Resting State functional Magnetic Resonance Imaging); 3 Tesla fMRI (3T); Blood Oxygenation Level Dependent (BOLD); Electro Encephalography (EEG).</p></caption>
<graphic xlink:href="24308829v4_tbl1.tif" mimetype="image" mime-subtype="tiff"/>
<graphic xlink:href="24308829v4_tbl1a.tif" mimetype="image" mime-subtype="tiff"/>
<graphic xlink:href="24308829v4_tbl1b.tif" mimetype="image" mime-subtype="tiff"/>
<graphic xlink:href="24308829v4_tbl1c.tif" mimetype="image" mime-subtype="tiff"/>
</table-wrap>
<p>Our key objectives with this report are twofold. In Part I, we evaluate the initial set of collated net neural enhancement versus suppression hypotheses (<xref rid="tblb3" ref-type="table">Box 3</xref>), and we conduct an initial meta-analysis of the available healthy human participant low-intensity TUS reports. We conclude Part I by establishing an open Iowa-Newcastle (inTUS) resource, including a database that can grow with TUS research community input and an analysis script that can (re)analyze the data. The inTUS resource is offered to encourage TUS researchers to report outcomes on a broader and more systematic exploration of the TUS stimulation parameter space. The reporting approach that we use is as recommended by the International Transcranial Ultrasonic Stimulation Safety and Standards (ITRUSST) consortium, which has proposed standards to enable comparison and reproducibility across studies (<xref ref-type="bibr" rid="c101">Martin et al., 2024</xref>), also see <ext-link ext-link-type="uri" xlink:href="https://itrusst.com">https://itrusst.com</ext-link>.</p>
<p>In Part II of this report, we selectively summarize the current state of the literature on human TUS applications for perturbing the brain and developing treatments for neurological and psychiatric disorders. This literature review is not intended to be a comprehensive review of the TUS literature on clinical applications. More comprehensive reviews of this literature can be found elsewhere (<xref ref-type="bibr" rid="c103">Matt et al., 2024</xref>; <xref ref-type="bibr" rid="c120">Pellow et al., 2024</xref>). Instead, this selective summary of TUS in specific clinical disorders aims to illustrate how hypotheses on the directionality of TUS effects need to be patient and brain area/system specific. Therefore, at the conclusion of each of the Part II sections, we motivate testable hypotheses on how TUS could be employed to enhance or suppress function for that patient-specific application. We encourage the reader to continue to develop hypotheses, not limited to the examples provided here.</p>
</sec>
</sec>
<sec id="s1c">
<title>Part I. Net enhancement and suppression hypotheses and meta-analysis</title>
<p>In this section, we, 1) consider the rationale for the hypotheses regarding the directionality of TUS effects (<xref rid="tblb3" ref-type="table">Box 3</xref>); 2) overview the approach for the meta-analysis; and, 3) discuss the initial analyses and results obtained with the meta-analysis of the database, including the limitations of the current approach. We conclude by establishing the database and analysis script as an inTUS community resource that can grow. The inTUS resource includes the inTUS_DATABASE tables and an R markdown script to recreate the analyses as the database grows in R Studio. To make the resource more interactive and user friendly, even without relying on R or R Studio, the user can study the results via an HTML summary of the results and figures and browse TUS parameter interactions via an online app. The inTUS resource aims to support the more systematic exploration and reporting of the TUS parameter space and outcomes, as recommended by the ITRUSST consortium (<xref ref-type="bibr" rid="c101">Martin et al., 2024</xref>). We hope that the TUS community will be able to contribute to growing the database for further hypothesis development, empirical testing and modeling.</p>
<sec id="s1d">
<title>Net enhancement and suppression hypotheses</title>
<p>The hypotheses summarized in <xref rid="tblb3" ref-type="table">Box 3</xref> are based on TUS parameters that have been highlighted in the TUS literature to be capable of biasing TUS effects on a given brain region towards neural enhancement or suppression. These hypotheses were generated both from the NICE model (<xref ref-type="bibr" rid="c123">Plaksin et al., 2016</xref>; <xref ref-type="bibr" rid="c124">Plaksin et al., 2014</xref>) and preclinical studies with animal models. The preclinical studies of TUS effects have reported conditions under which TUS could potentially bias the directionality of effects towards greater excitation or inhibition. The NICE model hypothesized that two key parameters associated with net activation or suppression (using the authors’ terminology) are sonication intensity in the target brain area (ISSPA in brain) and the continuity of stimulation (duty cycle, DC). The NICE model predictions are shown in <xref rid="fig4" ref-type="fig">Figure 4</xref> with a light blue line defining the border between neural enhancement (higher DC and intensity) and suppression (lower DC and intensity). Other parameters of interest are ISPTA, which mathematically multiplies ISPPA by the continuity of sonication (DC), and the length of the sonication pulse (Sonication Duration, SD). Shorter SDs (&lt;500 ms) have been reported to elicit more action potentials from excitatory neurons, and longer SDs (&gt;500 ms) tend to elicit suppression via greater excitation of <italic>inhibitory</italic> neurons (<xref ref-type="bibr" rid="c106">Mihran et al., 1990</xref>; <xref ref-type="bibr" rid="c151">Tsui et al., 2005</xref>). Other studies have suggested that pulse-repetition frequency (PRF), the frequency with which the ultrasound pulse is turned on/off, can bias towards greater net excitation at higher PRFs (<xref ref-type="bibr" rid="c68">Kim et al., 2023</xref>; <xref ref-type="bibr" rid="c165">Yu et al., 2020</xref>). These hypotheses are summarized in <xref rid="tblb3" ref-type="table">Box 3</xref>.</p>
<fig id="fig4" position="float" orientation="portrait" fig-type="figure">
<label>Figure 4.</label>
<caption><title>Online and offline TUS study parameters and outcomes.</title>
<p>(A) Online effects, based on the studies in <xref rid="tbl1" ref-type="table">Table 1</xref>, are shown segregated by probable enhancement versus suppression. Light blue line shows the NICE model boundary between suppression and enhancement. Blue circles are human studies reporting probable enhancement, red circles probable suppression. Index numbers correspond to the studies numbered in <xref rid="tbl1" ref-type="table">Table 1</xref>. (B) Same format and analysis approach showing the “offline” effects studies in <xref rid="tbl2" ref-type="table">Table 2</xref> with stars. Numbers correspond to the studies numbered in <xref rid="tbl2" ref-type="table">Table 2</xref>. (C) Combined figure with online (<xref rid="tbl1" ref-type="table">Table 1</xref>) and offline (<xref rid="tbl2" ref-type="table">Table 2</xref>) studies. Same symbol and color use as in A-B. (D) Additional hypothesized parameters, such as pulse repetition frequency (PRF), can be plotted from the inTUS_DATABASE in multi-dimensional spaces as shown and with the inTUS resource app.</p></caption>
<graphic xlink:href="24308829v4_fig4.tif" mimetype="image" mime-subtype="tiff"/>
</fig>
<table-wrap id="tbl2" orientation="portrait" position="float">
<label>Table 2.</label>
<caption><title>Human ‘offline’ TUS studies categorized by probable enhancement or suppression.</title><p>Summarized are the TUS parameters used in human studies (inTUS_DATABASE_1-2025.csv) aiming to induce longer lasting ‘offline’ effects. Format as in <xref rid="tbl1" ref-type="table">Table 1</xref>. <italic>Abbreviations of Brain Targets:</italic> Dorso-Lateral Prefrontal Cortex (DLPFC); Primary Motor Cortex (M1); dorsal-Anterior Cingulate Cortex (dACC); Posterior Cingulate Cortex (PCC); Somatosensory Cortex (S1); Ventral Posterolateral Nucleus (VPL); Nucleus Accumbens (NAcc); Inferior-Prefrontal Gyrus (IPFC); Inferior Frontal Gyrus (IFG); right-Inferior Frontal Gyrus (rIFG); right-Medial Frontal Gyrus (rMFG). <italic>Abbreviations of Measurements:</italic> Transcranial Magnetic Stimulation (TMS); Short-Interval Interhemispheric Inhibition (SIHI); Intracortical Facilitation (ICF); Short-Interval Intracortical Inhibition (SICI); Short-Interval Intracortical Facilitation (SICF); Long-Term Potentiation (LTP); repetitive-Transcranial Ultrasound (rTUS); theta-burst TUS (tbTUS); resting-state functional Magnetic Resonance Imaging (rs-fMRI); Blood Oxygenating Level Dependent (BOLD); Electroencephalography (EEG); Motor Evoked Potential (MEP); Contact Heat Evoked Potential (CHEP); Reaction Time (RT); Heart Rate Variability (HRV); Default Mode Network (DMN).</p></caption>
<graphic xlink:href="24308829v4_tbl2.tif" mimetype="image" mime-subtype="tiff"/>
<graphic xlink:href="24308829v4_tbl2a.tif" mimetype="image" mime-subtype="tiff"/>
<graphic xlink:href="24308829v4_tbl2b.tif" mimetype="image" mime-subtype="tiff"/>
<graphic xlink:href="24308829v4_tbl2c.tif" mimetype="image" mime-subtype="tiff"/>
</table-wrap>
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<sec id="s1e">
<title>Segregating ‘online’ and longer lasting ‘offline’ effects</title>
<p>Studies of online or offline effects tend to use different TUS parameters (compare <xref rid="tbl1" ref-type="table">Tables 1</xref> and <xref rid="tbl2" ref-type="table">2</xref>). Offline effects of TUS stimulation are those induced for longer time periods after the sonication period (seconds or minutes). Because many human studies aim to keep the intensity of offline stimulation within FDA and/or ITRUSST guidelines (<xref rid="tblb2" ref-type="table">Box 2</xref>), a different parameter range for online and offline studies may be implemented by TUS researchers. Namely, for offline studies, DC and ISPTA values are often kept low (<xref rid="fig4" ref-type="fig">Figure 4B</xref>). For this reason, we summarize the online and offline studies in separate tables (<xref rid="tbl1" ref-type="table">Tables 1</xref>-<xref rid="tbl2" ref-type="table">2</xref>) and include this distinction as a factor in the database meta-analyses.</p>
</sec>
<sec id="s1f">
<title>Meta-analysis inclusion criteria and analysis approach</title>
<p>The meta-analysis approach follows the Preferred Reporting Items for Systematic reviews and Meta-Analyses (PRISMA) guidelines (<xref rid="fig3" ref-type="fig">Figure 3</xref>). We searched PubMed/MEDLINE for studies published through 1<sup>st</sup> January 2025 by employing the combination of the following keywords: ‘human’, ‘ultrasound’, ‘focused’, ‘low-intensity’, ‘stimulation’, ‘transcranial’, ‘neuromodulation’, ‘TUS’, ‘FUN’, ‘LIFUS’ ‘clinical’, ‘treatment’ (see <xref rid="fig3" ref-type="fig">Figure 3</xref> for the papers in the initial sample). Four authors (HC, NS, CP and MZ) searched for and curated the included studies to ensure that the survey was as comprehensive as possible. We searched only for articles in English. Study inclusion criteria for the meta-analysis focused on human studies involving low-intensity TUS for brain stimulation or neuromodulation. The included studies encompassed only healthy human participants to avoid including clinical studies of patients with brain pathology at this stage of the database development, although we intend to include patient clinical studies in future versions of the database. We excluded studies with moderate-intensity or high-intensity ultrasound used for, respectively, BBB perturbation or thermal ablation, outside of the scope of the current version of the database. Given the currently small size of the database, we expected the analyses not to be robust to missing data. For this reason, we had to exclude 4 diagnostic ultrasound studies (<xref ref-type="bibr" rid="c54">Gibson et al., 2018</xref>; <xref ref-type="bibr" rid="c55">Guerra et al., 2021</xref>; <xref ref-type="bibr" rid="c56">Hameroff et al., 2013</xref>; <xref ref-type="bibr" rid="c136">Schimek et al., 2020</xref>), which did not report the parameters we needed for the meta-analysis. After applying the inclusion and exclusion criteria, 32 studies were included in the first inTUS_DATABASE_6-2024, and 47 studies were included in the next key expansion of the database: inTUS_DATABASE_1-2025. Further key database expansions, analyses and results will be reported in the inTUS resource location noted below. For the meta-analysis, we only included studies that either reported a basic set of TUS stimulation parameters or those sufficient for estimating the required parameters necessary for the meta-analysis.</p>
<p>The reported studies’ TUS parameters and reported effects were used to populate the data tables (<xref rid="tbl1" ref-type="table">Table 1</xref> for online studies; <xref rid="tbl2" ref-type="table">Table 2</xref> for offline studies). Most parameters required for the analysis could be found in the reported studies or calculated from the parameters given. If a given study conducted multiple complete experiments, the sample sizes reflect the overall number of experiments rather than the number of studies/papers, and if separate experiments tested different values of a given parameter with the same result, the experiment eliciting the strongest effect was input into the database for meta-analysis. A number of experiments (n = 14 out of 37 in the inTUS_DATABASE_6-2024, and an additional, n = 13 out of the 15 additional experiments added in the inTUS_DATABASE_1-2025), although reporting ISPPA values in water, did not report ISSPA values in the brain, required for our analyses, which is a recognized problem for this field (<xref ref-type="bibr" rid="c101">Martin et al., 2024</xref>). For these studies, we applied an accepted approximation of ISPPA values, because the sonic wave passes through and loses much of its energy at the skull, whereby typically 70-75% of the intensity is lost (<xref ref-type="bibr" rid="c46">Fomenko et al., 2020</xref>; <xref ref-type="bibr" rid="c81">Lee et al., 2015</xref>; <xref ref-type="bibr" rid="c109">Mueller et al., 2014</xref>; <xref ref-type="bibr" rid="c116">Oghli et al., 2023</xref>; <xref ref-type="bibr" rid="c158">Xia et al., 2024</xref>; <xref ref-type="bibr" rid="c169">Zeng et al., 2024</xref>). We compared these approximated values entered into the database to simulations using k-plan software (<xref ref-type="bibr" rid="c62">Jaros et al., 2020</xref>; <xref ref-type="bibr" rid="c150">Treeby &amp; Cox, 2010</xref>), targeting the same regions as in the reported experiments with the reported ISPPA in water values. Comparing the k-plan simulation values to the estimated values showed a low margin of error of ∼5% between the two sets of values in the comparisons. Therefore, we used the approximated values for studies not reporting ISPPA in the brain.</p>
<p>Probable net neural enhancement versus suppression was characterized as follows. Note that our use of the terms enhancement and suppression refers exclusively to the increase or decrease of neural activity, respectively, as measured by, neurophysiological methods (EEG-ERPs, BOLD fMRI, etc.) and do not imply equivalent changes in behavioral responses. Although many studies have reported behavioral influences, these alone were not sufficient for us to determine the probable directionality of underlying neural TUS effects. Although many TUS studies report using a sham control (e.g., no TUS or an inverted TUS transducer that directs the sonic energy away from the head), it is difficult to rule out other sources for placebo effects in the behavioral reports. We thereby focused on the studies’ reporting of neurobiological effects and characterized these effects as probable net neural enhancement versus neural suppression, using the following approach. For net enhancement, we followed the prior approach established by the TMS field, whereby EEG-evoked responses that are magnified in the target area as a function of TUS application could be characterized as probable enhancement (see <xref rid="tbl1" ref-type="table">Tables 1</xref>-<xref rid="tbl2" ref-type="table">2</xref>). We included positive fMRI BOLD effects resulting from TUS as a probable enhancement. For suppression, we also followed the prior approach established by the TMS field, whereby EEG evoked responses that were reduced indicate likely suppression of neural activity. Wherever possible, we relied on independently characterized directionality of effects, and we cite the original sources that conducted the characterization in <xref rid="tbl1" ref-type="table">Tables 1</xref> and <xref rid="tbl2" ref-type="table">2</xref>. As an example of a study categorized as ‘neural suppression’ of function, Legon and colleagues (<xref ref-type="bibr" rid="c87">Legon et al., 2014</xref>) examined TUS targeting the primary somatosensory cortex (S1) in healthy human subjects with EEG. The authors reported that TUS significantly attenuated somatosensory evoked potentials. The effects were specific to the targeted region, because the changes were abolished when the acoustic beam was focused away from S1. As another example, Liu and colleagues applied TUS to S1 of participants performing a sensory discrimination task, and they reported augmented somatosensory spatiotemporal EEG responses, which are interpreted as increased local excitability or ‘neural enhancement’ by our terminology (<xref ref-type="bibr" rid="c93">Liu et al., 2021</xref>).</p>
<p>The resulting database tables were submitted to an exploratory univariate logistic regression model tested with R Studio. The R markdown script used to generate the results from the data tables is shared as part of the inTUS resource below. The sample sizes in the initial inTUS_DATABASE_06-2024 were 37 experimental observations of each of the TUS parameters in the database. The sample sizes in the subsequent inTUS_DATABASE_01-2025 were 52 experimental observations. The first statistical model tested the Enhancement versus Suppression Effect separately for ISPPA, Duty Cycle, PRF and SD from the hypotheses with the Mode of stimulation ‘online’ or ‘offline’ as a covariate (e.g., logit ∼ OfflineOnline + Isppa, etc.). A single model with all factors and all interactions would have been preferred, but with these sample sizes is not sufficiently powered to provide meaningful results. This will be revisited in the future when sample sizes increase through the database expansion via the inTUS resource. For the second key database expansion period (inTUS_DATABASE_01-2025), we also conducted an initial multivariate pattern analysis using a Random Forest Walk analysis implemented in python (Scikit-learn: Machine Learning in Python) (<xref ref-type="bibr" rid="c119">Pedregosa et al., 2011</xref>).</p>
</sec>
<sec id="s1g">
<title>Human TUS meta-analysis results</title>
<p>The meta-analysis used the data in <xref rid="tbl1" ref-type="table">Tables 1</xref> and <xref rid="tbl2" ref-type="table">2</xref> from the inTUS_DATABASE_1-2025.csv. The tables summarize the range of TUS parameters of interest for the studies reporting probable enhancement or suppression of TUS effects. The rationale for characterization of the directionality of TUS effects, independently evaluated wherever possible, is summarized in <xref rid="tbl1" ref-type="table">Tables 1</xref>-<xref rid="tbl2" ref-type="table">2</xref> in the rightmost column. The database is further separated by studies aiming to elicit online (<xref rid="tbl1" ref-type="table">Table 1</xref>) or offline effects (<xref rid="tbl2" ref-type="table">Table 2</xref>). Further key evaluation periods of the inTUS database, as it expands, may not be reported with updates to this paper, but will continue to be reported online in the inTUS resource. The statistical models, statistical output variables and resulting figures are available and can be recreated in the inTUS resource for any of the datasets available via the R markdown script.</p>
</sec>
<sec id="s1h">
<title>Results from initial <italic>inTUS_DATABASE_6-2024</italic></title>
<p>This section reports the results from the first database analysis (inTUS_DATABASE_6-2024.csv), with a sample size of n = 37 experiments (from 33 studies). The statistical model for DC was significantly associated with the Enhancement versus Suppression, our effect of interest (<italic>p</italic> = 0.046). Sonication duration (Thurman et al.) was also significantly associated with the effect of interest (SD: <italic>p</italic> = 0.040). Consistent with the hypotheses in <xref rid="tblb3" ref-type="table">Box 3</xref>, higher DC values were significantly associated with Enhancement (n = 21; mean DC during Enhancement = 29.952, standard deviation (STD) = 23.252), lower values with Suppression (n = 16; mean DC during Suppression = 16.719; SD = 17.159). Also consistent with the hypotheses in <xref rid="tblb3" ref-type="table">Box 3</xref>, lower SD brain values were significantly associated with Enhancement (n = 21; mean SD = 14.6190, STD = 28.736) and higher values with suppression (n = 16, mean SD = 29.612, STD = 41.369). A statistical trend was present for the Online and Offline covariate factor (<italic>p</italic> = 0.061), as might be expected given the different parameters that are often used for online and offline studies (<xref rid="fig4" ref-type="fig">Figure 4a-b</xref>).</p>
<p>There was no significant effect for ISSPA brain (<italic>p</italic> = 0.256), and the other parameters of interest were also not significantly associated with our effect of interest in this dataset: pulse repetition frequency (PRF: <italic>p</italic> = 0.324) or ISPTA (<italic>p</italic> = 0.787). Therefore, in this initial dataset evaluation, only DC and SD were significantly associated with Enhancement versus Suppression in the hypothesized direction (<xref rid="tblb3" ref-type="table">Box 3</xref>). No multivariate pattern analyses were attempted with this dataset.</p>
</sec>
<sec id="s1i">
<title>Results from inTUS_DATABASE_1-2025</title>
<p>This section reports the results from the <italic>second</italic> key database expansion meta-analysis (inTUS_DATABASE_1-2025.csv), with a sample size of n = 52 experiments (from 47 studies) as shown in <xref rid="tbl1" ref-type="table">Tables 1</xref>-<xref rid="tbl2" ref-type="table">2</xref>. The exploratory univariate statistical model for DC (<italic>p</italic> = 0.077) and for ISSPA brain (<italic>p</italic> = 0.097) showed a statistical trend in their association with the Enhancement versus Suppression effect of interest. Consistent with the hypotheses in <xref rid="tblb3" ref-type="table">Box 3</xref>, higher DC values trended in association with Enhancement (n = 27; mean DC during Enhancement = 25.333, standard deviation (SD) = 22.231), lower values with Suppression (n = 25; mean DC during Suppression = 17.630; SD = 16.052). Inconsistent with the hypotheses in <xref rid="tblb3" ref-type="table">Box 3</xref>, <italic>lower</italic> ISPPA brain values trended in association with Enhancement (n = 27; mean ISPPA brain during Enhancement = 5.276 W/cm<sup>2</sup>, standard deviation (SD) = 4.696), higher values with Suppression (n = 25; mean ISPPA brain during Suppression = 9.221; SD = 10.718).</p>
<p>The Online and Offline study covariate factor was not significantly different in any of the statistical models (<italic>p</italic> &gt; 0.1). Rerunning the statistical models separately on the Online and Offline effects did not result in any of these parameters showing a significant association or a statistical trend, consistent with the effects not being statistically distinguishable in the current database (1-2025). This might be either because the sample sizes are not sufficiently powered for statistical effects to be observed or the TUS community might be converging somewhat in the TUS parameters used for online or offline stimulation (<xref rid="fig4" ref-type="fig">Fig. 4</xref>). The remaining parameters of interest were not significantly associated with the Enhancement versus Suppression effect of interest: PRF (<italic>p</italic> = 0.324) and sonication duration (SD: p = 0.326).</p>
<p>For this database, we conducted an initial multivariate pattern analysis using a Random Forest Walk procedure (53 observations, 4 variables: PRF, DC, SD, ISPPA brain, from <xref rid="tbl1" ref-type="table">Tables 1</xref> and <xref rid="tbl2" ref-type="table">2</xref>). The mean accuracy of effect classification (200 times 5-fold cross-validation) with all these variables was 0.55 (SD = 0.14), compared to analysis with a shuffled target variable (TUS effect directionality: Enhancement vs Suppression; mean 0.48 and SD = 0.15), see <xref rid="fig6" ref-type="fig">Figure 6</xref>. Although the accuracy of the database predicting the effect of interest is numerically above chance, the SD values overlap the original and shuffled data, and the permutation importance of the parameter values (<xref rid="fig6" ref-type="fig">Figure 6</xref>, right panel), are low (between 0.04 and –0.06). These observations suggest that the database sample size is too small to provide a meaningful result with this multivariate analysis at this stage. The classification accuracy was similar when all variables from <xref rid="tbl1" ref-type="table">Tables 1</xref>-<xref rid="tbl2" ref-type="table">2</xref> were included in the analysis (8 variables: FF, PRF, DC, SD, PD, ISPPA_water, ISPPA_brain, ISPTA_brain; classification accuracy 0.57, SD = 0.14; shuffled accuracy 0.50, SD = 0.14).</p>
</sec>
<sec id="s1j">
<title>Impressions from the <italic>inTUS_DATABASE_1-2025</italic> results</title>
<p>Given the still limited sample size of human TUS studies to date, we interpret these meta-analysis results with caution. A key observation is that the NICE model is not as strongly predictive as initially thought (<xref ref-type="bibr" rid="c36">Dell’Italia et al., 2022</xref>; <xref ref-type="bibr" rid="c172">Zhang et al., 2023</xref>). Nonetheless, in the exploratory univariate analyses, DC and ISPPA are statistical trends for an association with the categorical Enhancement versus Suppression variable in the database. The DC effect is in the hypothesized direction. However, the ISPPA_brain effect is not (see <xref rid="tblb3" ref-type="table">Box 3</xref>; compare <xref rid="fig5" ref-type="fig">Figure 5</xref> for DC and ISSPA_brain). Namely, consistent with the hypotheses in <xref rid="tblb3" ref-type="table">Box 3</xref>, higher DC values trended in association with Enhancement and lower values with Suppression. Inconsistent with the hypotheses in <xref rid="tblb3" ref-type="table">Box 3</xref>, lower ISPPA brain values trended in association with Enhancement and higher values with Suppression (see <xref rid="fig5" ref-type="fig">Figure 5</xref>). The multivariate pattern analyses with the four parameters of interest classified at an accuracy level close to chance and the factor importance values were too small to be meaningfully interpreted (<xref rid="fig6" ref-type="fig">Fig. 6</xref>). In relation to the initial dataset results (inTUS_DATABASE_6-2024), the DC factor which was significant in the first is now a trend in the second analysis. The ISPPA_brain factor was not significant previously with the univariate analyses, but is a trend with the second dataset evaluated (inTUS_DATABASE_1-2025). Therefore, the effects are still labile and may change, warranting caution in over-interpretation at this stage.</p>
<fig id="fig5" position="float" orientation="portrait" fig-type="figure">
<label>Figure 5.</label>
<caption><title>Box plots of meta-analysis results for the TUS parameters of interest.</title>
<p>Shown are boxplots for TUS parameters of interest segregated by probable enhancement or suppression (data from <xref rid="tbl1" ref-type="table">Tables 1</xref> and <xref rid="tbl2" ref-type="table">2</xref>). Plots show TUS parameters: Pulse Repetition Frequency (PRF), Duty Cycle (DC), Sonication Duration (Thurman et al.) and ISPPA Brain. These are shown separately for Online effects (A) and Offline effects (B).</p></caption>
<graphic xlink:href="24308829v4_fig5.tif" mimetype="image" mime-subtype="tiff"/>
</fig>
<fig id="fig6" position="float" orientation="portrait" fig-type="figure">
<label>Figure 6.</label>
<caption><title>Random Forest Walk multivariate pattern analysis results.</title>
<p>Results of the Random Forest analysis with the 4 parameters of interest in the second key database inTUS_DATABASE_1-2025 compared to a shuffled parameter dataset (left). Left panel shows the average accuracy (mean = 0.55; SD = 0.14) is not far from the shuffled dataset (mean = 0.48; SD = 0.15), suggesting that the dataset size may not yet be robust for multivariate analyses. The right panel shows the ordered decrease in accuracy when the variable is permuted (permutation importance: higher values carry more importance). We observe that the importance values are low (between –0.06 and 0.04; right panel), warranting caution in interpretation at this stage of the inTUS database</p></caption>
<graphic xlink:href="24308829v4_fig6.tif" mimetype="image" mime-subtype="tiff"/>
</fig>
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<sec id="s1k">
<title>Theta Burst TUS for offline neuromodulation</title>
<p>Theta-burst TUS (tb-TUS) is being studied for its capability to induce cortical LTP-like plasticity for an extended period of time (<xref ref-type="bibr" rid="c33">Darmani et al., 2025</xref>; <xref ref-type="bibr" rid="c116">Oghli et al., 2023</xref>; <xref ref-type="bibr" rid="c132">Samuel et al., 2023</xref>; <xref ref-type="bibr" rid="c133">Samuel et al., 2022</xref>; <xref ref-type="bibr" rid="c168">Zeng et al., 2022</xref>). Theta-burst TUS protocols are identified in <xref rid="tbl2" ref-type="table">Table 2</xref>. We observe that tb-TUS protocols tend to consist of a more continuous stimulation approach than online protocols, such as 80s trains of 20ms sonication pulses spaced over 200ms (i.e., pulsed at a 4-8 Hz theta frequency). However, independent replication of these findings remains limited. For example, Bao <italic>et al</italic>., found reduced motor cortex excitability – measured as decreased TMS-MEP amplitude in M1 -- that lasted up to 30 minutes post- sonication (<xref ref-type="bibr" rid="c10">Bao et al., 2024</xref>). Whereas Fong <italic>et al</italic>. reported no significant effects between tbTUS and sham conditions in M1 excitability (<xref ref-type="bibr" rid="c47">Fong et al., 2024</xref>). These studies, although growing, are still too few to consider separately, and as such are currently included as ‘offline’ studies in the database. Of note, some groups are seeing enhancement and others disruption with their tb-TUS protocols (<xref rid="tbl2" ref-type="table">Table 2</xref>). As the number of tb-TUS studies grows in the database, it will be important to evaluate tb-TUS outcomes and compare these to other TUS stimulation protocols.</p>
</sec>
<sec id="s1l">
<title>Meta-analysis limitations</title>
<p>A key limitation of this meta-analysis is the relatively small sample size. Multi-variate analyses of these data could have more predictability with greater sample sizes to provide deeper insights into the interplay of TUS parameters and effects. Moreover, some effects with certain parameters of interest have statistically changed between the initial (6-2024) and second (1-2025) key dataset evaluation periods reported here. Therefore, as noted above, the effects remain labile but may stabilize with future dataset expansion and evaluation periods. Currently it is unclear which if any TUS parameters or sets of parameters together will be good predictors for controlling the directionality of TUS effects. Another limitation is the inherent selection bias of retrospective studies, whereby researchers may limit their exploration of the TUS parameter space based on studies with positive findings. Researchers may also be limiting their brain targeting options, and there may be a positive finding reporting bias. Moreover, we and others have noted that not all TUS researchers share the full set of key parameters necessary for secondary hypothesis testing, even though the ITRUSST consortium has recommended that TUS studies report a basic set of parameters like those included in the inTUS database (<xref ref-type="bibr" rid="c101">Martin et al., 2024</xref>). For instance, we had to simulate the derated ISPTA values in the brain, which although comparable to our k-plan simulation values warrant caution when interpreting results. Therefore, the results from the 6-2024 and 1-2025 databases analyses need to be considered as purely explorative. For this reason, we have not evaluated the predictability of the models, which the statistical tests at this stage suggest is low.</p>
<p>We will continue to periodically report updates to these results in the inTUS resource, and the database and results can be re-analyzed at any time using the R markdown script in the freely available software R Studio. We hope that the inTUS resource will encourage more systematic exploration and reporting of the TUS parameter space, complemented with computational modeling to fill gaps in the empirical research. Other caveats worth mentioning are that the TUS community is relatively small, and many researchers work with several TUS research groups around the world. It is important to be able to identify independent replication studies. In the online version of the table, which can expand as needed, we have included additional columns that could be used for future analyses, including a column to identify independent replication or contradiction studies. Another important facet is that the current database has focused on healthy participants. Patient studies and those in animal models (e.g., rodents and nonhuman primates) would be important to include in future iterations of the database, and we welcome input on growing the database via the inTUS Qualtrics survey. Moreover, in the online data table we have added a column to identify cortical versus subcortical sites that were stimulated. Currently most TUS studies in the database have focused on cortical stimulation. These additional columns could be used for further analysis and hypothesis testing as the database grows.</p>
</sec>
<sec id="s1m">
<title>How to use and contribute to the <italic>inTUS Resource</italic></title>
<p>To help to address the noted limitations to the current database, we establish the inTUS Resource as an open database and a set of analysis tools. The inTUS Resource can be found in the Open Science Framework link here: <ext-link ext-link-type="uri" xlink:href="https://osf.io/arqp8/">https://osf.io/arqp8/</ext-link>, in the folder associated with this paper (Caffaratti_et_al_inTUS_Resource folder). This repository contains the data tables at each of the key evaluation periods (currently 6-2024 and 1-2025) and the R markdown script to regenerate the statistical tests, results and figures using the freely available R or R Studio software (Posit). The resource also has a link to a Qualtrics form that researchers can use to submit parameters and outcomes as part of their preprint or published work. A more detailed description of the inTUS resource contents, how they are curated and how to contribute to the resource can be found as a READ_ME file in the resource documents page, a copy of which we have appended at the end of this report. Please cite this paper if you use or rely on the inTUS Resource.</p>
<p>As noted here, not all studies are reporting the range of ITRUSST recommended TUS stimulation parameters. We encourage TUS researchers to contribute more accurate values to the database from their studies and to more systematically report the more complete set of values as recommended by the ITRUSST consortium (<xref ref-type="bibr" rid="c101">Martin et al., 2024</xref>). This will allow the data to be mined more completely, which may further support or refute these or other hypotheses. We will retain the historic datasets on the resource pages as a point of reference. We welcome input via the online form on improving the criteria for assessing neurobiological or behavioral effects, which will benefit the entire TUS community and is a key objective of the ITRUSST consortium <ext-link ext-link-type="uri" xlink:href="https://itrusst.com/">https://itrusst.com/</ext-link>. The original OSF link noted here will point to the location of the repository even if it moves location.</p>
</sec>
<sec id="s1n">
<title>Meta-analysis summary</title>
<p>Given the sample size limitations, these retrospective meta-analysis results are tentative, with the possibility that the results may stabilize, strengthen or change. The combination of the meta-analysis and resource are made openly available as an inTUS Resource to further support and encourage the TUS research community to more systematically report TUS parameters and study outcomes. Furthermore, we encourage the TUS research community to explore the full TUS parameter space whenever safe and possible to conduct in human and nonhuman animals or rely on computational modeling for exploration of the extreme reaches of the TUS parameter space. We fully anticipate that this effort will dovetail with a need for further computational modeling and empirical study in human and nonhuman animals. TUS effects could also in the future benefit from being modeled across the cortical depth, in interaction with other brain areas (<xref ref-type="bibr" rid="c147">Thorpe et al., 2024</xref>) or insights on the impact on cell and molecular properties of the neural network.</p>
</sec>
</sec>
<sec id="s1o">
<title>Part II. Selective TUS clinical applications review and TUS directionality hypotheses</title>
<p>Compared to pharmaceutical drugs that can affect many parts of the brain and body, TUS allows the stimulation of specific targets within the brain with relatively high spatial precision. Here, we selectively review potential applications for low-intensity TUS that are currently investigational. We also selectively consider moderate-intensity applications for Blood Brain Barrier (BBB) perturbation and high-intensity TUS for clinical thermal ablation. While the primary goal of BBB opening is to regionally increase the permeability of the BBB to enhance the efficacy of brain drug delivery, BBB opening alone could induce neuromodulatory effects (<xref ref-type="bibr" rid="c28">Chu et al., 2015</xref>). Our purpose with the below selective review is not to provide another comprehensive review of the TUS clinical application literature (<xref ref-type="bibr" rid="c103">Matt et al., 2024</xref>; <xref ref-type="bibr" rid="c120">Pellow et al., 2024</xref>). Instead, our purpose here is to illustrate how hypotheses on the directionality of TUS effects could be developed, which we do not intend to be limited to the examples provided here. The reader will notice that for some applications there are no or few TUS studies, whereas for other applications there are more. Nonetheless, for each example application in the low-intensity TUS section where directionality of effects on neuromodulation could be useful to harness, we have aimed to motivate at the end of each section example testable hypotheses that could be further developed. We hope the reader finds this exercise useful, because TUS clinical applications and the directionality of effects need to be specifically tailored for the pathologies and brain regions/network being targeted.</p>
<sec id="s1p">
<title>Ia. Low-intensity TUS applications</title>
<sec id="s1p1">
<title>Motor and somatosensory system mapping</title>
<p>Intraoperative clinical motor and somatosensory cortical mapping is important for planning neurosurgical treatment. TMS over the motor cortex is regularly used to induce muscle contractions and limb movements. The effect of TMS on the amplitude of muscle-evoked potentials is an accepted measure of motor cortical enhancement (increased motor-cortical evoked EEG potentials) or suppression (decreased MEPs) (<xref ref-type="bibr" rid="c45">Fitzgerald et al., 2006</xref>). In preclinical research, low- or moderate-intensity TUS focused on motor cortex in rodents can induce muscle contractions (<xref ref-type="bibr" rid="c71">King et al., 2014</xref>; <xref ref-type="bibr" rid="c152">Tufail et al., 2010</xref>; <xref ref-type="bibr" rid="c163">Yoo et al., 2011</xref>; <xref ref-type="bibr" rid="c164">Younan et al., 2013</xref>), including limb, tail, whisker or eye muscle contraction (<xref ref-type="bibr" rid="c71">King et al., 2014</xref>). TUS in humans targeting the motor cortex can either enhance or suppress MEPs (<xref rid="tbl1" ref-type="table">Table 1</xref>) (<xref ref-type="bibr" rid="c54">Gibson et al., 2018</xref>; <xref ref-type="bibr" rid="c78">Lee et al., 2016a</xref>; Legon, Bansal, et al., 2018; <xref ref-type="bibr" rid="c133">Samuel et al., 2022</xref>; <xref ref-type="bibr" rid="c157">Xia et al., 2021</xref>; <xref ref-type="bibr" rid="c168">Zeng et al., 2022</xref>; Y. <xref ref-type="bibr" rid="c173">Zhang et al., 2021</xref>). Stimulation of the primary motor cortex with TUS has been found to decrease reaction times in a stimulus-response task, which is interpreted as enhanced motor performance (<xref ref-type="bibr" rid="c46">Fomenko et al., 2020</xref>; Legon, Bansal, et al., 2018; <xref ref-type="bibr" rid="c171">Zhang et al., 2022</xref>; Y. <xref ref-type="bibr" rid="c173">Zhang et al., 2021</xref>).</p>
<p>For mapping human somatosensory cortex, TUS has been reported to either enhance or suppress somatosensory evoked potentials (SEPs) recorded with EEG, and TUS can elicit a range of somatosensory perceptions, such as tactile sensations in the hand contralateral to the stimulated somatosensory cortex (<xref ref-type="bibr" rid="c81">Lee et al., 2015</xref>; <xref ref-type="bibr" rid="c87">Legon et al., 2014</xref>). Legon <italic>et al</italic>. demonstrated impaired performance in a tactile spatial discrimination task from TUS stimulation of the ventro-posterior lateral nucleus of the thalamus (Legon, <xref ref-type="bibr" rid="c2">Ai, et al., 2018</xref>). This effect was related to the disruption of the corresponding SEP component (Legon, <xref ref-type="bibr" rid="c2">Ai, et al., 2018</xref>). <italic><underline>Hypothesis</underline>:</italic> For clinical motor or somatosensory cortical mapping, TUS could induce movement behavior or somatosensory percepts by stimulating motor/somatosensory sites. Alternatively, TUS could be used to suppress ongoing motor functions (hand squeeze, arm drop).</p>
</sec>
<sec id="s1p2">
<title>Speech and language mapping</title>
<p>Intra-operative brain mapping using electrical stimulation is used by neurosurgeons to identify brain areas crucial for speech and language (<xref ref-type="bibr" rid="c13">Benzagmout et al., 2007</xref>; E. F. <xref ref-type="bibr" rid="c21">Chang et al., 2015</xref>; <xref ref-type="bibr" rid="c40">Duffau, 2010</xref>; <xref ref-type="bibr" rid="c99">Mandonnet et al., 2017</xref>; <xref ref-type="bibr" rid="c102">Mathias et al., 2016</xref>). The gold-standard approach identifies speech and language areas using electrical stimulation to elicit speech arrest, naming or other language difficulties (<xref ref-type="bibr" rid="c40">Duffau, 2010</xref>; <xref ref-type="bibr" rid="c102">Mathias et al., 2016</xref>). However, because of the limited time in the operating room for patient brain mapping, there is considerable interest in developing pre-operative non-invasive brain stimulation approaches for speech and language brain mapping. For instance, TMS, when used with MRI-based neuro-navigation to target neocortical speech and language regions, can lead to speech arrest or anomia, which generally corresponds to the locale of intra-operative mapping using electrical stimulation (<xref ref-type="bibr" rid="c146">Tarapore et al., 2013</xref>). Furthermore, TMS is often integrated with adjunctive methodologies such as electroencephalography (EEG), functional magnetic resonance imaging (fMRI), or diffusion tensor imaging (DTI) to bolster the precision and specificity of brain-behavioral mapping. To date there do not appear to be TUS studies focused on speech and language mapping, defining a clear research need. <italic><underline>Hypothesis</underline>:</italic> For speech and language mapping, TUS could temporarily suppress brain areas important for speech production and language function, analogous to the current use of electrical stimulation for intra-operative mapping of neocortical areas involved in these processes.</p>
</sec>
<sec id="s1p3">
<title>Mood disorders</title>
<p>TUS has been explored as a possible treatment for psychiatric mood disorders. In a study from 2013, in humans with chronic pain, TUS administered to the posterior frontal cortex contralateral to the source of pain elicited a significant mood enhancement after 40 minutes (<xref ref-type="bibr" rid="c56">Hameroff et al., 2013</xref>). Sanguinetti <italic>et al</italic>. reported that TUS targeting the right ventrolateral prefrontal cortex led to reports of improved mood in healthy individuals after TUS (<xref ref-type="bibr" rid="c134">Sanguinetti et al., 2020</xref>). In a double-blind pilot study, Reznik and colleagues applied TUS to the right fronto-temporal cortex of depressed patients, resulting in mood improvement (<xref ref-type="bibr" rid="c127">Reznik et al., 2020</xref>; <xref ref-type="bibr" rid="c137">Shimokawa et al., 2022</xref>). Forster <italic>et al</italic>. used TUS to indirectly manipulate cingulate cortex activity in a learned helplessness task, demonstrating the potential to affect the response to acute stressors that can induce symptoms of depression (<xref ref-type="bibr" rid="c48">Forster et al., 2023</xref>). Further pre-clinical and clinical trial studies would be necessary to evaluate TUS efficacy in alleviating mood disorder symptoms. <italic><underline>Hypothesis</underline>:</italic> TUS could be used to target highly interconnected brain network hubs associated with depression risk or resilience (<xref ref-type="bibr" rid="c149">Trapp et al., 2023</xref>) to potentially modulate mood bidirectionally.</p>
</sec>
<sec id="s1p4">
<title>Schizophrenia</title>
<p>Early pilot results for patients suffering from psychosis are now available. In a double-blind, randomized, sham-controlled study, 15 sessions of TUS over the left dorsolateral prefrontal cortex (DLPFC) could alleviate negative symptoms in schizophrenia patients and enhance cognitive performance in a continuous performance test (<xref ref-type="bibr" rid="c170">Zhai et al., 2023</xref>). TUS was well tolerated with patients in the active group, which did not report more adverse effects than patients in the sham group. The use of TUS seems particularly promising due to the involvement of deep-brain structures, such as the thalamus in this condition (<xref ref-type="bibr" rid="c110">Mukherjee &amp; Halassa, 2024</xref>). <italic><underline>Hypothesis</underline>:</italic> For TUS application to schizophrenia, TUS could suppress the function of target areas, reducing the positive or negative symptoms associated with schizophrenia.</p>
</sec>
<sec id="s1p5">
<title>Disorders of Consciousness</title>
<p>Low-intensity TUS has shown the capability to hasten the recovery of behavioral responsiveness in patients with disorders of consciousness (<xref ref-type="bibr" rid="c78">Lee et al., 2016a</xref>). Monti and colleagues documented a case where low-intensity TUS aimed at the thalamus was associated with the emergence from a minimally conscious state in patients experiencing disorders of consciousness following severe brain injury (<xref ref-type="bibr" rid="c107">Monti et al., 2016</xref>). <italic><underline>Hypothesis</underline>:</italic> For this clinical application, TUS could enhance the function of thalamic nuclei and interconnectivity with other brain areas, such as the centro-median-perifascicular nuclei of the thalamus and the mesencephalic reticular formation (<xref ref-type="bibr" rid="c29">Chudy et al., 2023</xref>). However, it is worth noting that a more permanent approach, such as electrical deep brain stimulation (DBS), may be required in some patients or a combination of TUS ‘mapping’ followed by DBS.</p>
</sec>
<sec id="s1p6">
<title>Alzheimer’s disease</title>
<p>Cognitive decline associated with dementia would benefit from approaches that can enhance cognitive function. In a study with 11 Alzheimer’s disease (AD) patients using transcranial pulse stimulation (TPS; typically shorter pulses of low-intensity ultrasound stimulation over a longer period of time) targeting the hippocampus, the authors reported that 63% of patients improved on one or more cognitive assessment (<xref ref-type="bibr" rid="c114">Nicodemus et al., 2019</xref>). In another study involving 35 AD patients, TPS was applied to the dorsolateral prefrontal cortex (<xref ref-type="bibr" rid="c12">Beisteiner et al., 2020</xref>). The patients’ neuropsychological scores significantly improved after TPS, and these improvements were reported to have persisted for up to three months. However, TPS studies remain highly limited and would require further study and comparison to effects with other TUS protocols. <italic><underline>Hypothesis</underline>:</italic> TUS for AD applications could enhance the function of target regions to enhance or stabilize neural system inter-connectivity and cognitive function.</p>
</sec>
<sec id="s1p7">
<title>Parkinson’s disease</title>
<p>In a study by Nicodemus <italic>et al</italic>. 11 patients took part in research with TUS for Parkinson’s Disease (PD) targeting the substantia nigra. In this study, 87% of the patients had either stable or improved fine motor scores and 88% had stable or improved gross motor scores (<xref ref-type="bibr" rid="c114">Nicodemus et al., 2019</xref>). Samuel <italic>et al</italic>. used a technique called accelerated theta-burst TUS targeting the primary motor cortex in 10 PD patients, studying its impact on neurophysiological and clinical outcomes (<xref ref-type="bibr" rid="c132">Samuel et al., 2023</xref>). Their patients received both active and sham TUS conditions, and the authors measured TMS-elicited motor-evoked potentials (MEPs) before and after treatment. The study found a significant increase in TMS induced MEP amplitudes following TUS but not sham treatment. <italic><underline>Hypothesis</underline>:</italic> For applications related to PD, TUS of the subthalamic nucleus could suppress its function in a lasting way if targeting the motor segment of the nucleus can be conducted with precision to avoid limbic or sensory parts of the nucleus.</p>
</sec>
<sec id="s1p8">
<title>Epilepsy</title>
<p>TUS application to an epileptogenic site has the potential to modulate seizure frequency. To evaluate these possibilities, Lee <italic>et al</italic>. applied low-intensity TUS to individuals with drug-refractory epilepsy undergoing intracranial electrode monitoring with stereo-electroencephalography (SEEG) (<xref ref-type="bibr" rid="c77">Lee et al., 2022</xref>). Two of the six patients studied showed a <italic>decrease</italic> in seizure occurrences, while one experienced an <italic>increase</italic>. The TUS effects reported were at electrode contacts near to the subsequent neurosurgical treatment site for epilepsy. Across all frequency bands in the local field potential recorded from the SEEG electrodes, there was a notable decrease in spectral power for all six patients following TUS. However, there was no clear relationship between these immediate effects on interictal epileptiform discharges and alterations in seizure frequency (<xref ref-type="bibr" rid="c77">Lee et al., 2022</xref>). Another study introduced a device for delivering pulsed low-intensity TUS to the hippocampus in humans, with no reported adverse events after multiple sessions (<xref ref-type="bibr" rid="c16">Brinker et al., 2020</xref>). A study by Bubrick <italic>et al</italic>. described the application of serial TUS in patients with mesial temporal lobe epilepsy. TUS was delivered in 6 sessions over 3 weeks. No adverse events or side effects were reported. Early results were promising, with significant seizure reduction in 5 out of 6 patients reported for up to 6 months after TUS application (<xref ref-type="bibr" rid="c17">Bubrick et al., 2024</xref>). <italic><underline>Hypothesis</underline>:</italic> For epilepsy treatment, TUS could reduce the probability of seizures. However, for clinical mapping of epileptogenic sites, clinical mapping during epilepsy monitoring procedures will depend on TUS inducing epileptiform activity.</p>
<sec id="s1p8a">
<title>Sudden unexpected death in epilepsy</title>
<p>Sudden unexpected death in epilepsy (SUDEP) refers to the sudden unexpected death of a person with epilepsy that cannot be explained by trauma or status epilepticus. On post-mortem examination, no structural or toxicological cause of death can be ascertained. SUDEP is one of the leading causes of premature deaths in epilepsy, accounting for more than a 20-fold increase in the risk of sudden death in epileptic patients compared with the general population (<xref ref-type="bibr" rid="c43">Ficker et al., 1998</xref>; <xref ref-type="bibr" rid="c73">Kløvgaard et al., 2022</xref>). Among all neurological conditions, it ranks second after stroke in terms of years of potential life lost (<xref ref-type="bibr" rid="c148">Thurman et al., 2014</xref>). Rare cases of SUDEP of patients in epilepsy monitoring units have shown that cessation of breathing (apnea) following seizures precedes terminal asystole and death (<xref ref-type="bibr" rid="c11">Bateman et al., 2008</xref>; <xref ref-type="bibr" rid="c113">Nashef &amp; Brown, 1996</xref>; <xref ref-type="bibr" rid="c131">Ryvlin et al., 2013</xref>). Animal models (<xref ref-type="bibr" rid="c66">Johnston et al., 1995</xref>) confirm a primary role of respiratory dysfunction in SUDEP. In the human patient work by Dlouhy and colleagues (<xref ref-type="bibr" rid="c39">Dlouhy et al., 2015</xref>; <xref ref-type="bibr" rid="c58">Harmata et al., 2023</xref>; <xref ref-type="bibr" rid="c128">Rhone et al., 2020</xref>), it was shown that when a circumscribed site in the amygdala, referred to as the Amygdala Inhibition of Respiration (AIR) site, is affected either by the spread of seizure or by electrical stimulation, apnea occurs without the patient feeling any air hunger or alarm (<xref ref-type="bibr" rid="c76">Lacuey et al., 2017</xref>; <xref ref-type="bibr" rid="c115">Nobis et al., 2019</xref>). In a subsequent study by <xref ref-type="bibr" rid="c58">Harmata et al., 2023</xref>, electrical stimulation or stimulation evoked seizure within a focal region of the AIR site evoked apnea that persisted well beyond the end of stimulation or seizure. Because this site in the amygdala caused persistent inhibition of respiration, the authors referred to this site as the pAIR site. The AIR site, proposed to be a brain region that mediates seizure-induced inhibition of breathing, which can persist for minutes and may lead to SUDEP.</p>
<p>Localization and characterization of the AIR site and pAIR site have so far been done using electrical stimulation in patients who have electrodes implanted for potential surgical remediation of epilepsy. This puts a severe constraint; only a limited population of individuals with epilepsy who are candidates for electrode implantation have contributed to the characterization of these sites. Extension to a larger population of epileptic patients without amygdala implantation and non-epileptic patient controls require the use of non-invasive methods. Given the deep subcortical location of the AIR and pAIR sites, approaches such as TMS are less suitable for this purpose. Because TUS has the capability to target deep areas with higher spatial resolution, it can be used to target not only the AIR sites in the amygdala, but also the respiratory network underlying SUDEP. Although there is a pressing research need for TUS research into controlling SUDEP, we could not find TUS studies on SUDEP in the literature. <italic><underline>Hypothesis</underline>:</italic> TUS could suppress amygdala function to prevent apnea. However, rather than controlling SUDEP risk during epileptic seizures, if TUS cannot induce lasting effects or be implemented continuously, its utility may be better suited to identify people at high risk for SUDEP based on seizure-associated apnea. Namely, TUS could be used to stimulate the AIR site to confirm its location for subsequent neurosurgical ablation, for example, to reduce or eliminate epilepsy patient SUDEP risk.</p>
</sec>
</sec>
<sec id="s1p9">
<title>Stroke and neuroprotection in brain injury</title>
<p>Low-intensity TUS has been studied for its potential neuroprotective benefits following brain injury and stroke by boosting neurotrophic factors as well as angio-neurogenesis (increased brain derived neurotrophic factor (BDNF), increased vascular endothelial growth factor (VEGF) and reduced apoptosis) (<xref ref-type="bibr" rid="c15">Bretsztajn &amp; Gedroyc, 2018</xref>; <xref ref-type="bibr" rid="c60">Ichijo et al., 2021</xref>; <xref ref-type="bibr" rid="c135">Schellinger et al., 2015</xref>; <xref ref-type="bibr" rid="c144">Su et al., 2017</xref>; <xref ref-type="bibr" rid="c152">Tufail et al., 2010</xref>; <xref ref-type="bibr" rid="c161">Yang et al., 2015</xref>).Chen <italic>et al</italic>. <bold>s</bold>timulated mice with TUS before inducing cerebral ischemia and reported , reporting improved neurological function and decreased neuronal cell apoptosis (<xref ref-type="bibr" rid="c23">Chen et al., 2018</xref>).</p>
<p>In a randomized controlled trial, Wang <italic>et al</italic>. investigated the effects of TUS combined with cognitive rehabilitation on post-stroke cognitive impairment (<xref ref-type="bibr" rid="c155">Wang et al., 2022</xref>). The group receiving both TUS and cognitive rehabilitation exhibited improvement in a range of cognitive measures compared to the group that received cognitive rehabilitation alone. (<xref ref-type="bibr" rid="c156">Wu et al., 2019</xref>)This type of work suggests that TUS could be a potential preventive therapy for recurrent stroke, presuming it can have longer lasting effects after stimulation or be delivered (semi)continuously as needed. (<xref ref-type="bibr" rid="c57">Hanawa et al., 2014</xref>; <xref ref-type="bibr" rid="c60">Ichijo et al., 2021</xref>; <xref ref-type="bibr" rid="c61">Imashiro et al., 2021</xref>)TUS has also been explored as a non-invasive thrombectomy tool to enhance thrombolysis with tissue plasminogen activator in acute stroke (<xref ref-type="bibr" rid="c135">Schellinger et al., 2015</xref>). For stroke thrombectomy, TUS would act to break up thrombocytes with or without a tissue plasminogen activator. An earlier study, by Liu <italic>et al</italic>., indicated that administering TUS soon after a stroke could yield neuroprotective effects (<xref ref-type="bibr" rid="c95">Liu et al., 2019</xref>). Thus, there has been interest in evaluating whether initiating TUS promptly post-stroke could effectively enhance cerebral blood flow, revive local circulation, save the ischemic penumbra, and minimize brain tissue harm. However, TUS appears to have also led to a higher incidence of cerebral hemorrhage in patients concurrently treated with intravenous tissue-type Plasminogen Activator, tPA (<xref ref-type="bibr" rid="c31">Daffertshofer et al., 2005</xref>; <xref ref-type="bibr" rid="c67">Katsanos et al., 2020</xref>; <xref ref-type="bibr" rid="c135">Schellinger et al., 2015</xref>) .<italic><underline>Hypothesis</underline>:</italic> TUS applications for stroke recurrence could enhance neuroplasticity and vascular perfusion, or they can be used to improve thrombolysis after acute stroke.</p>
</sec>
<sec id="s1p10">
<title>Hypertension and cardiovascular system effects</title>
<p>As a promising noninvasive therapy for drug-refractory hypertensive patients, Li and colleagues demonstrated the antihypertensive effects and protective impact on organ damage by using low-intensity TUS stimulation in spontaneously hypertensive rats (<xref ref-type="bibr" rid="c89">Li et al., 2023</xref>). The experiment involved daily 20-minute TUS stimulation sessions targeting the ventrolateral periaqueductal gray in the rats for two months. Their results showed a significant reduction in systolic blood pressure, reversal of left ventricular hypertrophy, and improved heart and kidney function. The sustained antihypertensive effect may be attributed to the activation of antihypertensive neural pathways and the inhibition of the renin-angiotensin system. Ji and colleagues explored the feasibility of using low-intensity TUS to modulate blood pressure in rabbits (<xref ref-type="bibr" rid="c65">Ji et al., 2020</xref>). The study used a TUS system to stimulate the left vagus nerve in rabbits while recording blood pressure in the right common carotid artery. Different TUS intensities were tested, showing a decrease in systolic and diastolic blood pressure, mean arterial pressure and heart rate (<xref ref-type="bibr" rid="c65">Ji et al., 2020</xref>). The higher the TUS intensity, the more significant the blood pressure reduction. These pre-clinical studies in animal models highlight the possibility of non-drug management of hypertension using TUS, opening avenues for treating clinical hypertension non-invasively. <italic><underline>Hypothesis</underline>:</italic> TUS for hypertension application could suppress sympathetic nodes (e.g., rostral ventro-lateral medulla) or enhance parasympathetic nodes (e.g., medial prefrontal cortex) in the central autonomic network (<xref ref-type="bibr" rid="c97">Macefield &amp; Henderson, 2020</xref>; <xref ref-type="bibr" rid="c138">Shoemaker, 2022</xref>).</p>
</sec>
</sec>
<sec id="s1p11">
<title>Ib. Moderate intensity TUS applications</title>
<p>For moderate intensity TUS application, we do not generate directionality of TUS effects hypotheses. This section is only intended to provide a brief introduction to moderate intensity TUS applications, mainly to distinguish them from low-intensity TUS neuromodulation.</p>
<sec id="s1p12">
<title>Enhancing pharmacological- and immuno-therapy through the blood-brain barrier</title>
<p>A significant challenge in drug- or immune-therapy is the limited effectiveness of drugs and vectors that do not easily traverse the blood-brain barrier (BBB) (<xref ref-type="bibr" rid="c59">Hynynen et al., 2006</xref>; <xref ref-type="bibr" rid="c104">Mehta et al., 2021</xref>), an issue that has been explored in the context of using antibodies to amyloid β to treat Alzheimer’s disease. TUS has the ability to temporarily open the BBB, facilitating the entry of vectors into the brain from the blood stream. Systemic injection of microbubbles when combined with TUS temporarily opens the BBB, with BBB integrity restored within 4–6 hours (<xref ref-type="bibr" rid="c59">Hynynen et al., 2006</xref>; <xref ref-type="bibr" rid="c104">Mehta et al., 2021</xref>). Lipsman and colleagues conducted a phase I safety trial, using TUS to safely and reversibly open the BBB in five patients diagnosed with early to moderate AD (<xref ref-type="bibr" rid="c91">Lipsman et al., 2018</xref>). They achieved predictable BBB opening at approximately 50% of the power at which cavitation was observed during a test using the NeuroBlate system. Right after the ultrasound treatment, a distinct rectangular-shaped enhancement was visible in the targeted brain region on T1-weighted gadolinium MR images. This enhancement was resolved within 24 hours after the procedure, suggestive of successful closure of the BBB. The moderate intensity TUS did not lead to any significant clinical or radiographic adverse events, nor a noticeable decline in cognitive scores at the three-month follow-up when compared to baseline. Importantly, no serious adverse events, such as hemorrhages, swelling, or neurological deficits were reported either on the day of the procedure or during the follow-up study period. Rezai <italic>et al</italic>. employed TUS to breach the BBB in a study involving six AD patients (<xref ref-type="bibr" rid="c126">Rezai et al., 2020</xref>). Post-treatment contrast-enhanced MRI scans displayed rapid and significant enhancement in the hippocampus, which subsequently resolved. Throughout the several TUS treatments, no adverse effects were observed, and there was no cognitive or neurological functional decline. In a study by Jeong <italic>et al</italic>. involving four AD patients, moderate-intensity TUS of the hippocampus did not exhibit evidence of actively opening the BBB, as observed in T1 dynamic contrast-enhanced MRI (<xref ref-type="bibr" rid="c63">Jeong et al., 2021</xref>; <xref ref-type="bibr" rid="c64">Jeong et al., 2022</xref>). However, the authors found that the regional cerebral metabolic rate of glucose (rCMRglu) in the superior frontal gyrus and middle cingulate gyrus significantly increased following TUS treatment. The patients also demonstrated mild improvement in measures of cognitive function after TUS, including memory function. Although BBB opening could lead to neuromodulatory effects, its effects at the network level are distinct from those achieved with TUS for neuromodulation (<xref ref-type="bibr" rid="c94">Liu et al., 2023</xref>).</p>
</sec>
</sec>
<sec id="s1p13">
<title>Ic. High-intensity ultrasound for thermal ablation</title>
<p>For high intensity TUS application, we do not generate directionality of TUS effects hypotheses. This section is only intended to provide a brief introduction to high intensity TUS applications and to distinguish these from low-intensity TUS.</p>
<sec id="s1p14">
<title>Parkinson’s disease</title>
<p>Moser <italic>et al</italic>. introduced high-intensity MR-guided TUS for thermal ablation as a potential treatment option for Parkinson’s disease, employing it to target and ablate the connections between the thalamus and globus pallidus (<xref ref-type="bibr" rid="c108">Moser et al., 2013</xref>). Their approach improved the patients’ Unified Parkinson’s Disease Rating Scale (UPDRS) score by 57%. This potential therapeutic benefit of high-intensity ultrasound for PD was further underscored by Magara <italic>et al</italic>. in 2014, who used MR-guided TUS to thermally ablate the unilateral pallidothalamic tract in PD patients, resulting in significant improvement in the UPDRS score three months post-surgery (<xref ref-type="bibr" rid="c98">Magara et al., 2014</xref>).</p>
</sec>
<sec id="s1p15">
<title>Essential tremor</title>
<p>TUS at high intensities that cause tissue ablation has FDA-approved application for essential tremor following large, randomized clinical trials (<xref ref-type="bibr" rid="c26">Choi &amp; Kim, 2019</xref>; <xref ref-type="bibr" rid="c74">Krishna et al., 2018</xref>). Precision thermal ablation of subthalamic nuclei is increasingly considered as an alternative to deep brain stimulation for select patients (<xref ref-type="bibr" rid="c129">Rohani &amp; Fasano, 2017</xref>). MR-guided TUS is being employed in treating essential tremor (ET) with the thalamic ventral intermediate (VIM) nucleus as the primary target (<xref ref-type="bibr" rid="c1">Abe et al., 2020</xref>; W. S. <xref ref-type="bibr" rid="c21">Chang et al., 2015</xref>; <xref ref-type="bibr" rid="c41">Elias et al., 2013</xref>; <xref ref-type="bibr" rid="c42">Elias et al., 2016</xref>; <xref ref-type="bibr" rid="c92">Lipsman et al., 2013</xref>; <xref ref-type="bibr" rid="c105">Meng et al., 2018</xref>). This thalamotomy technique has demonstrated therapeutic benefits for essential tremor patients and has received FDA approval for unilateral treatment (<xref ref-type="bibr" rid="c42">Elias et al., 2016</xref>). The reported side effects of thermal ablation with high-intensity TUS include early symptoms of dizziness, nausea/vomiting, headache, skull overheating, flushing, and late symptoms such as ataxia and paresthesia (<xref ref-type="bibr" rid="c1">Abe et al., 2020</xref>; W. S. <xref ref-type="bibr" rid="c21">Chang et al., 2015</xref>; <xref ref-type="bibr" rid="c41">Elias et al., 2013</xref>; <xref ref-type="bibr" rid="c42">Elias et al., 2016</xref>; <xref ref-type="bibr" rid="c92">Lipsman et al., 2013</xref>; <xref ref-type="bibr" rid="c105">Meng et al., 2018</xref>).</p>
</sec>
<sec id="s1p16">
<title>Epilepsy</title>
<p>In a recent case report, MR-guided high-intensity TUS was found to be effective in a patient with medically intractable epilepsy, resulting in 12 months of seizure freedom (<xref ref-type="bibr" rid="c1">Abe et al., 2020</xref>). For a more extensive review of TUS for thermal ablation in epilepsy patients see (<xref ref-type="bibr" rid="c30">Cornelssen et al., 2023</xref>).</p>
</sec>
</sec>
</sec>
<sec id="s3">
<title>Introduction to the Iowa-Newcastle (inTUS)</title>
<sec id="s3a">
<title>Transcranial Ultrasound Stimulation Resource</title>
<p>The inTUS Resource consists of the following resource items, linked to Caffaratti et al. <bold><italic>Neuromodulation with Ultrasound: Hypotheses on the Directionality of Effects and a Community Resource.</italic></bold> Please cite the latest eLife paper when using and referring to the inTUS resource: <ext-link ext-link-type="uri" xlink:href="https://elifesciences.org/reviewed-preprints/100827">https://elifesciences.org/reviewed-preprints/100827</ext-link>.</p>
<p>The inTUS Resource documents can be found on the Laboratory of Comparative Neuropsychology data share on the Open Science Framework: <ext-link ext-link-type="uri" xlink:href="https://osf.io/arqp8/">https://osf.io/arqp8/</ext-link> under the folder Cafferatti_et_al_inTUS_Resource. If the location of the repository changes, a link to its location will be left here.</p>
<sec id="s3a1">
<title>Resource documents</title>
<list list-type="bullet">
<list-item><p><bold>Database Tables</bold>
<list list-type="bullet">
<list-item><p>inTUS_DATABASE_1-2025.csv
<list list-type="bullet">
<list-item><p>Certain key historic versions will be retained, e.g., the initial inTUS_DATABASE_6-2024.csv</p></list-item>
</list>
</p></list-item>
<list-item><p><underline>InTUS_DATABASE_1-2025_description.pdf</underline> describes the columns in the database</p></list-item>
</list>
</p></list-item>
<list-item><p><bold>R Markdown script</bold> to regenerate the figures and statistics using R Studio, and example PDF/HTML output if not using R to more quickly visualize TUS parameter effects.
<list list-type="bullet">
<list-item><p><underline>TUS_Effects_1-2025_Ranalyses.Rmd</underline> is the executable R markdown script, which executes the statistical models and figures. To run the script, install the freely available R Studio software (<ext-link ext-link-type="uri" xlink:href="https://posit.co/">https://posit.co/</ext-link>). Run the script sections as described in the instructions at the top of the script (tested in R Studio version RStudio-2024.12.0-467).</p></list-item>
<list-item><p><underline>InTUS_OUTPUT_1-2025.pdf</underline> is an example output file generated by the latest database, if the reader more quickly wants to see the latest output without having to run the R markdown script: <ext-link ext-link-type="uri" xlink:href="https://rpubs.com/BenSlaterNeuro/1268823">https://rpubs.com/BenSlaterNeuro/1268823</ext-link></p></list-item>
<list-item><p><underline>Data visualization online</underline> app to visualize the TUS parameters data: <ext-link ext-link-type="uri" xlink:href="https://benslaterneuro.shinyapps.io/Caffaratti_inTUS_Resource/">https://benslaterneuro.shinyapps.io/Caffaratti_inTUS_Resource/</ext-link></p></list-item>
</list>
</p></list-item>
<list-item><p><bold>To contribute to the database please use the Qualtrics Survey</bold>
<list list-type="bullet">
<list-item><p><bold>Qualtrics Survey</bold> to submit your paper and data so that it can be considered for addition to the database. Please use this link: <ext-link ext-link-type="uri" xlink:href="https://uiowa.qualtrics.com/jfe/form/SV_4VOvb0fdwvACDkO">https://uiowa.qualtrics.com/jfe/form/SV_4VOvb0fdwvACDkO</ext-link></p></list-item>
</list>
</p></list-item>
</list>
</sec>
<sec id="s3a2">
<title>Using the resource</title>
<p>To regenerate the manuscript figures with the latest tables, Download the latest <italic>database table</italic> and <italic>R_script</italic>. Run the script in R or R Studio making sure it can access the inTUS database you are interested in (e.g., that the database is visible in the R Studio working directory).</p>
</sec>
<sec id="s3a3">
<title>Contributing to the resource</title>
<p>Please use the Qualtrics Link and Form to submit your preprint or published paper data. These submissions will be checked and once verified will be added to the database: <ext-link ext-link-type="uri" xlink:href="https://uiowa.qualtrics.com/jfe/form/SV_4VOvb0fdwvACDkO">https://uiowa.qualtrics.com/jfe/form/SV_4VOvb0fdwvACDkO</ext-link></p>
</sec>
<sec id="s3a4">
<title>How the resource is curated</title>
<p>To ensure that the database has TUS researcher checked information, we have established the Qualtrics form that can be used to submit a preprint or publication citation and associated TUS values and outcomes. The human TUS expert factor ensures that a skilled researcher checks the submitted data that could be included in the database. Please note the inclusionary and exclusionary criteria in the paper, which may change with future database expansions. We are exploring the possibility of a collaboration with the ITRUSST consortium to sustain the resource and will update the OSF link if the location of the inTUS resource changes.</p>
</sec>
<sec id="s3a5">
<title>Only healthy humans?</title>
<p>This resource was initially established with healthy human participant low-intensity TUS studies. We will continue to expand the inTUS resource with the TUS community’s help and input. We are open to the resource being extended to human patients and nonhuman animals of different species. Please use the Qualtrics Form if you’re interested in helping or have suggestions about the resource.</p>
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</sec>
</sec>
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<sec sec-type="data-availability" id="das45">
<title>Data availability</title>
<p>The datasets and R script generated in this study have been deposited in the Open Science Framework <ext-link ext-link-type="uri" xlink:href="https://osf.io/arqp8/">https://osf.io/arqp8/</ext-link> in the ‘Caffaratti_et_al_inTUS_Resource’ folder.</p>
</sec>
<ack>
<title>Acknowledgements</title>
<p>Supported by National Institutes of Health USA (R01–DC04290; BRAIN Initiative U01-NS137991; S10RR028821), National Science Foundation (SBE-UKRI-2342847), and Medical Research Council (UK). Ben Slater is supported by a BBSRC UK PhD studentship. M.Ka. was supported by the Engineering and Physical Sciences Research Council (EP/W004488/1 and EP/X01925X/1) and the Guangci Professorship Program of Rui Jin Hospital (Shanghai Jiao Tong University)</p>
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</back>
<sub-article id="sa0" article-type="editor-report">
<front-stub>
<article-id pub-id-type="doi">10.7554/eLife.100827.3.sa2</article-id>
<title-group>
<article-title>eLife Assessment</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Chait</surname>
<given-names>Maria</given-names>
</name>
<role specific-use="editor">Reviewing Editor</role>
<aff>
<institution-wrap>
<institution-id institution-id-type="ror">https://ror.org/02jx3x895</institution-id><institution>University College London</institution>
</institution-wrap>
<city>London</city>
<country>United Kingdom</country>
</aff>
</contrib>
</contrib-group>
<kwd-group kwd-group-type="evidence-strength">
<kwd>Convincing</kwd>
</kwd-group>
<kwd-group kwd-group-type="claim-importance">
<kwd>Important</kwd>
</kwd-group>
</front-stub>
<body>
<p>This paper is an <bold>important</bold> overview of the currently published literature on low-intensity focused ultrasound stimulation (TUS) in humans, providing a meta-analysis of this literature that explores which stimulation parameters might predict the directionality of the physiological stimulation effects. The overall synthesis is <bold>convincing</bold>. The database proposed by the paper has the potential to become a key community resource if carefully curated and developed.</p>
</body>
</sub-article>
<sub-article id="sa1" article-type="referee-report">
<front-stub>
<article-id pub-id-type="doi">10.7554/eLife.100827.3.sa1</article-id>
<title-group>
<article-title>Reviewer #1 (Public review):</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<anonymous/>
<role specific-use="referee">Reviewer</role>
</contrib>
</contrib-group>
</front-stub>
<body>
<p>This paper is a relevant overview of the currently published literature on low-intensity focused ultrasound stimulation (TUS) in humans, with a meta-analysis of this literature that explores which stimulation parameters might predict the directionality of the physiological stimulation effects.</p>
<p>The pool of papers to draw from is small, which is not surprising given the nascent technology. It seems, nevertheless, relevant to summarise the current field in the way done here, not least to mitigate and prevent some of the mistakes that other non-invasive brain stimulation techniques have suffered from, most notably the theory- and data free permutation of the parameter space.</p>
<p>A database summarising the literature and allowing for quantitative assessment of these studies is a key contribution of the paper. If curated well, it can become a valuable community resource.</p>
<p>Comments on revisions:</p>
<p>The paper is much improved. There remain a few caveats the authors may want to address.</p>
<p>I'm not going to dwell on this if the authors don't agree, but remain critical about the inclusion of TPS in the discussion. It's comparing apples and oranges, and unless there's a personal interest the authors have in TPS, it remains puzzling why it is included in the first place. As per my previous review, the literature on TPS, and especially the main example cited, has been highly criticised, including national patient and medical associations. A mere disclaimer that more work is needed isn't enough, in this reviewer's opinion - I simply don't understand why the authors go out on a limb here when the rest of the paper is done so well and thoroughly.</p>
</body>
</sub-article>
<sub-article id="sa2" article-type="author-comment">
<front-stub>
<article-id pub-id-type="doi">10.7554/eLife.100827.3.sa0</article-id>
<title-group>
<article-title>Author response:</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Caffaratti</surname>
<given-names>Hugo</given-names>
</name>
<role specific-use="author">Author</role>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Slater</surname>
<given-names>Ben</given-names>
</name>
<role specific-use="author">Author</role>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Shaheen</surname>
<given-names>Nour</given-names>
</name>
<role specific-use="author">Author</role>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Rhone</surname>
<given-names>Ariane</given-names>
</name>
<role specific-use="author">Author</role>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Calmus</surname>
<given-names>Ryan</given-names>
</name>
<role specific-use="author">Author</role>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Kritikos</surname>
<given-names>Michael</given-names>
</name>
<role specific-use="author">Author</role>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Kumar</surname>
<given-names>Sukhbinder</given-names>
</name>
<role specific-use="author">Author</role>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Dlouhy</surname>
<given-names>Brian</given-names>
</name>
<role specific-use="author">Author</role>
<contrib-id contrib-id-type="orcid">http://orcid.org/0000-0001-6724-688X</contrib-id></contrib>
<contrib contrib-type="author">
<name>
<surname>Oya</surname>
<given-names>Hiroyuki</given-names>
</name>
<role specific-use="author">Author</role>
<contrib-id contrib-id-type="orcid">http://orcid.org/0000-0002-1733-5478</contrib-id></contrib>
<contrib contrib-type="author">
<name>
<surname>Griffiths</surname>
<given-names>Tim</given-names>
</name>
<role specific-use="author">Author</role>
<contrib-id contrib-id-type="orcid">http://orcid.org/0000-0001-8066-4381</contrib-id></contrib>
<contrib contrib-type="author">
<name>
<surname>Boes</surname>
<given-names>Aaron D</given-names>
</name>
<role specific-use="author">Author</role>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Trapp</surname>
<given-names>Nicholas</given-names>
</name>
<role specific-use="author">Author</role>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Kaiser</surname>
<given-names>Marcus</given-names>
</name>
<role specific-use="author">Author</role>
<contrib-id contrib-id-type="orcid">http://orcid.org/0000-0002-4654-3110</contrib-id></contrib>
<contrib contrib-type="author">
<name>
<surname>Sallet</surname>
<given-names>Jérôme</given-names>
</name>
<role specific-use="author">Author</role>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Banks</surname>
<given-names>Matthew I</given-names>
</name>
<role specific-use="author">Author</role>
<contrib-id contrib-id-type="orcid">http://orcid.org/0000-0002-1936-7529</contrib-id></contrib>
<contrib contrib-type="author">
<name>
<surname>Howard</surname>
<given-names>Matthew A</given-names>
<suffix>III</suffix></name>
<role specific-use="author">Author</role>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Zanaty</surname>
<given-names>Mario</given-names>
</name>
<role specific-use="author">Author</role>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Petkov</surname>
<given-names>Christopher I</given-names>
</name>
<role specific-use="author">Author</role>
</contrib>
</contrib-group>
</front-stub>
<body>
<p>The following is the authors’ response to the previous reviews</p>
<disp-quote content-type="editor-comment">
<p><bold>Reviewer #1 (Public review):</bold></p>
<p><bold>Summary:</bold></p>
<p>This paper is a relevant overview of the currently published literature on lowintensity focused ultrasound stimulation (TUS) in humans, with a meta-analysis of this literature that explores which stimulation parameters might predict the directionality of the physiological stimulation effects.</p>
<p>The pool of papers to draw from is small, which is not surprising given the nascent technology. It seems nevertheless relevant to summarize the current field in the way done here, not least to mitigate and prevent some of the mistakes that other non-invasive brain stimulation techniques have suffered from, most notably the theory- and data-free permutation of the parameter space.</p>
<p>The meta-analysis concludes that there are, at best, weak trends toward specific parameters predicting the direction of the stimulation effects. The data have been incorporated into an open database that will ideally continue to be populated by the community and thereby become a helpful resource as the field moves forward.</p>
<p><bold>Strengths:</bold></p>
<p>The current state of human TUS is concisely and well summarized. The methods of the meta-analysis are appropriate. The database is a valuable resource.</p>
</disp-quote>
<p>We thank the reviewer for their positive assessment of the revised manuscript and the potential importance of the resource to the TUS community.</p>
<disp-quote content-type="editor-comment">
<p><bold>Suggestions:</bold></p>
<p>The paper remains lengthy and somewhat unfocused, to the detriment of readability. One can understand that the authors wish to include as much information as possible, but this reviewer is sceptical that this will aid the use of the databank, or help broaden the readership. For one, there is a good chunk of repetition throughout. The intro is also somewhat oscillating between TMS, tDCS and TUS. While the former two help contextualizing the issue, it doesn't seem necessary. In the section on clinical applications of TUs and possible outcomes of TUS, there's an imbalance of the content across examples. That's in part because of the difference in knowledge base but some sections could probably be shortened, eg stroke. In any case, the authors may want to consider whether it is worth making some additional effort in pruning the paper</p>
</disp-quote>
<p>We thank the reviewer for these suggestions. We have checked for redundancy and that the clinical review section is more balanced, although some of the sections have more TUS studies than others, therefore some imbalance is unavoidable. As some examples, we have condensed the “Stroke and neuroprotection in brain injury” section (lines 624-647). This helps to improve the clarity and readability of the manuscript.</p>
<disp-quote content-type="editor-comment">
<p>The terms or concept of enhancement and suppression warrant a clearer definition and usage. In most cases, the authors refer to E/S of neural activity. Perhaps using terms such as &quot;neural enhancement&quot; etc helps distinguish these from eg behavioural or clinical effects. Crucially, how one maps onto the other is not clear. But in any case, a clear statement that the changes outlined on lines 277ff do not</p>
</disp-quote>
<p>We thank the reviewer for this point and agree that it is important to distinguish neural E/S, as we had intended, from behavioral effects. In the first instance and in several places we add ‘neural’ before enhancement/suppression.  Also see Lines 276-279: <bold>“</bold>Probable net neural enhancement versus suppression was characterised as follows. Note that our use of the terms enhancement and suppression refers exclusively to the increase or decrease of neural activity, respectively, as measured by, neurophysiological methods (EEG-ERPs, BOLD fMRI, etc.) and does not imply equivalent changes in behavioural responses<bold>”</bold></p>
<p>Please see also lines 108-116.</p>
<disp-quote content-type="editor-comment">
<p>Re tb-TUS (lines 382ff), it is worth acknowledging here that independent replication is very limited (eg Bao et al 2024; Fong et al bioRxiv 2024) and seems to indicate rather different effects</p>
</disp-quote>
<p>We have updated this section by referencing Bao et al. and Fong et al., as examples of the limited independent replication of tbTUS results. Please see lines 392-396. “However, independent replication of these findings remains limited. For example, Bao, found reduced motor cortex excitability – measured as decreased TMS-MEP amplitude in M1 -- that lasted up to 30 minutes post-sonication (Bao et al., 2024). Whereas Fong reported no significant effects between tbTUS and sham conditions in M1 excitability (Fong et al., 2024).”</p>
<disp-quote content-type="editor-comment">
<p>The comparison with TPS is troublesome. For one, that original study was incredibly poorly controlled and designed. Cherry-picking individual (badly conducted) proof-of-principle studies doesn't seem a great way to go about as one can find a match for any desired use or outcome. Moreover, other than the concept of &quot;pulsed&quot; stimulation, it is not clear why that original study would motivate the use of TUS in the way the authors propose; both types of stimulation act in very different ways (if TPS &quot;acts&quot; at all). But surely the cited TPS study does not &quot;demonstrate the capability for TUS for pre-operative cognitive mapping&quot;. As an aside, why the authors feel the need to state the &quot;potential for TPS... to enhance cognitive function&quot; is unclear, but it is certainly a non-sequitur. This review feels quite strongly that simplistic analogies such as the one here are unnecessary and misleading, and don't reflect the thoughtful discussion of the rest of the paper. In the other clinical examples, the authors build their suggestions on other TUS studies, which seems more sensible.</p>
</disp-quote>
<p>This is an excellent point, and we have removed that statement replacing it with: “However, TPS effects studies remain highly limited and would require further study and comparison to effects with other TUS protocols.”. Please see lines 561-562. We thank the reviewer for the supportive comments on the rest of the review.</p>
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</sub-article>
</article>